Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2879 ATGATTTTGAACATCATGAAAAAGTATTACATAAAGAATAACGACCAACCTGATTCTTCCTCCTCCTCCACCTCCTCCTCGGCCATCAGGATTTATGTGACATACGGCGAGTGCCAAAGGAACCAAGCCGAGTGGCTCGGAGGACACGCGGTTGACGGTTGTCAAGCTTTCATGCCGAGCGGAGAAGAAGGAACACCAGAAGCTCTCTCATGTGCCGCTTGTAACTGCCATAGGAGCTTCCACAAGCTTGAAGTGCATGCTGAAGGCGAAGACAGTAATGATTACCTTCCTCCACCACAAAGGAGCTAG 309 0.4919 MILNIMKKYYIKNNDQPDSSSSSTSSSAIRIYVTYGECQRNQAEWLGGHAVDGCQAFMPSGEEGTPEALSCAACNCHRSFHKLEVHAEGEDSNDYLPPPQRS* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2879 102 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 5 11 88 - -
Ahy14g2879 102 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 34 84 IPR006456 -
Ahy14g2879 102 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 11 88 - -
Ahy14g2879 102 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 35 84 IPR006456 -
Ahy14g2879 102 Pfam ZF-HD protein dimerisation region 33 84 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2879 Ahy-Chr14 137410362 137410873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2879 31 101 ZF-HD Transcription Factor Family AT2G02540 50.000 1.12e-22 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Ahy14g2879 ZF-HD_dimer 4.20E-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2879 - - ahf:112740679 212.616