Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2876 ATGGGAAGACCACCATGTTGTGATAAAGAAGGTGTGAAGAAAGGTCCTTGGACTCCTGAAGAAGATATCATTTTGGTCTCTTATATCCAAGAACATGGTCCTGGCAATTGGAGGGCTGTTCCTACCAACACAGGGTTATCAAGATGTAGCAAGAGTTGTAGACTTAGATGGACTAATTACTTGAGGCCTGGAATCAAAAGGGGTAACTTCACTGAACAAGAAGAAAAGATGATTATCCATCTTCAAGATCTCTTAGGAAACAGATGGGCTGCAATTGCTTCATACCTACCACAAAGGACGGATAATGATATAAAGAATTATTGGAACACGCATCTGAAGAAGAAGCTCAAGAAGTTGCAAGCTCCTAGTTCTGGAGTTTGCAACTTCGGCGGAACCGGAACTGGAACCGGAATTGAAACCGGAACGAATTATTCCGGTTCGATTCCGGTTCGAGGCCAATGGGAGCGAAGGCTCCAAACCGATATCCACATGGCGAAAAGAGCCCTCAGTGAAGCCCTTTCACCGGAGAACAATAATAATAATAGTAATAATAATAATTTTTGTTCTTCATCTTCAACAAAAGCGATTACACATCATCCAGGAACAAATAACAAGTGTTCAAGAACAAACTCTTCATCTTTGACTACTCAAAACAACAATTTCTTTGTTGTTAATGGTGGTGACACAGCTTCAAAGGGATCAGGAGGAAGTAGTAGCAATGATAACAGTGTTGAGTTGTCTGAAACCTTTGAATCCTTGTTTGGTTTGGAGTCTTTGGATTACTCATCAAACGCTACTACTACAACAACTACAACTACCACAACTACTTCAGATCATGATCATGATCATGATCAGTTTTCTCATCAATCTTTGTCTCCTAATGATGAGAACAATGTTTTTCAAGAAAATGAAAGCAAGCCTGAGATTATTGAAGATGTGATGCCATTCTCTTTGCTTGAGAAGTGGCTTCTTGAAGAGGTTGCTTGCCAAGATCAGAAAGTTATTACTGCCGATGCCAAGTTCTTCTAG 1029 0.4023 MGRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQAPSSGVCNFGGTGTGTGIETGTNYSGSIPVRGQWERRLQTDIHMAKRALSEALSPENNNNNSNNNNFCSSSSTKAITHHPGTNNKCSRTNSSSLTTQNNNFFVVNGGDTASKGSGGSSSNDNSVELSETFESLFGLESLDYSSNATTTTTTTTTTTSDHDHDHDQFSHQSLSPNDENNVFQENESKPEIIEDVMPFSLLEKWLLEEVACQDQKVITADAKFF* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2876 342 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Ahy14g2876 342 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy14g2876 342 Gene3D - 13 66 - -
Ahy14g2876 342 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy14g2876 342 CDD SANT 16 61 IPR001005 -
Ahy14g2876 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Ahy14g2876 342 MobiDBLite consensus disorder prediction 264 299 - -
Ahy14g2876 342 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 205 335 - -
Ahy14g2876 342 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 197 - -
Ahy14g2876 342 Gene3D - 68 125 - -
Ahy14g2876 342 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy14g2876 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Ahy14g2876 342 SMART sant 66 114 IPR001005 -
Ahy14g2876 342 SMART sant 13 63 IPR001005 -
Ahy14g2876 342 CDD SANT 69 111 IPR001005 -
Ahy14g2876 342 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 205 335 - -
Ahy14g2876 342 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 197 - -
Ahy14g2876 342 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy14g2876 342 MobiDBLite consensus disorder prediction 172 212 - -
Ahy14g2876 342 MobiDBLite consensus disorder prediction 225 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2876 Ahy-Chr14 137340146 137342027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2876 1 174 MYB Transcription Factor Family AT5G62470 75.862 1.29e-91 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy14g2876 Myb_DNA-binding 1.30E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2876 K09422 - gmx:778080 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2876 14 137340146 137342027 Ahy4g2526 4 123026367 123028228 hybridization
Ahy20g2539 20 133626852 133628703 Ahy14g2876 14 137340146 137342027 PCT
Ahy10g2052 10 108306081 108307916 Ahy14g2876 14 137340146 137342027 PCT
Ahy14g2876 14 137340146 137342027 Ahy20g2539 20 133626852 133628703 PCT
Ahy14g2876 14 137340146 137342027 Ahy10g2052 10 108306081 108307916 PCT