Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2873 ATGGTTCAGAGGCTCACTTATCGTAAGCGCCATAGCTATGCCACCAAATCCAACCAGCACCGTGTTGTCAAAACCCCCGGTGGGAAGCTGGTGTACCAGACCACGAAGAAGCGAGCAAGTGGACCAAAATGCCCTGTCACCGGAAAGAGGATCCAAGGGATTCCACATCTGAGACCTGCTGAATACAAGAGATCTAGGTTGCCTAGAAACCGCCGCACAGTGAACCGTGCCTATGGAGGTGTCTTGTCTGGAGGAGCAGTTAGAGAAAGGATTATCCGTGCTTTCCTTGTTGAGGAACAAAAAATTGTGAAGAAGGTGTTGAAGATCCAAAAGGCAAAAGAAAAGCAAGCATCAAGGAGTTAA 363 0.4848 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASRS* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2873 120 PRINTS Ribosomal protein L34 signature 13 26 IPR008195 GO:0003735|GO:0005840|GO:0006412
Ahy14g2873 120 PRINTS Ribosomal protein L34 signature 44 54 IPR008195 GO:0003735|GO:0005840|GO:0006412
Ahy14g2873 120 PRINTS Ribosomal protein L34 signature 26 43 IPR008195 GO:0003735|GO:0005840|GO:0006412
Ahy14g2873 120 PRINTS Ribosomal protein L34 signature 66 88 IPR008195 GO:0003735|GO:0005840|GO:0006412
Ahy14g2873 120 ProSitePatterns Ribosomal protein L34e signature. 15 28 IPR018065 -
Ahy14g2873 120 Pfam Ribosomal protein L34e 1 96 IPR008195 GO:0003735|GO:0005840|GO:0006412
Ahy14g2873 120 PANTHER 60S RIBOSOMAL PROTEIN L34 1 120 IPR008195 GO:0003735|GO:0005840|GO:0006412
Ahy14g2873 120 PANTHER - 1 120 - -
Ahy14g2873 120 Gene3D - 39 120 - -
Ahy14g2873 120 Gene3D - 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2873 Ahy-Chr14 137314846 137316310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2873 1 117 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 92.308 3.28e-75 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2873 K02915 - gmx:100305798 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2873 14 137314846 137316310 Ahy4g2523 4 123001288 123002748 hybridization