Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2871 ATGTCTAGCGGAAGCAGATCATCAAGGCAGCGATCTCACTCTACAAGGATCTCCGACGATCAAATCATCCAGCTTGTTTCCAAGTTGCGCCAACTTGTTCCAGAGATTCGCAATAGGCGCTCCGACAAGGTATCGGCTTCTAAGGTGCTGCAAGAGACTTGCAATTACATAAAAAACTTACACAGAGAGGTTGATGATTTAAGCGAGCGTTTGGGTCAGTTGTTATCCACAATTGATGCTGATAGTGCTGAAGCTGCCATCATTAGGAGCCTACTTAGCAACTAA 285 0.4526 MSSGSRSSRQRSHSTRISDDQIIQLVSKLRQLVPEIRNRRSDKVSASKVLQETCNYIKNLHREVDDLSERLGQLLSTIDADSAEAAIIRSLLSN* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2871 94 PANTHER TRANSCRIPTION FACTOR PRE 5 92 IPR044293 GO:0006355|GO:0040008|GO:0046983
Ahy14g2871 94 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 60 IPR011598 GO:0046983
Ahy14g2871 94 PANTHER TRANSCRIPTION REGULATOR 5 92 - -
Ahy14g2871 94 Coils Coil 50 77 - -
Ahy14g2871 94 Pfam Helix-loop-helix DNA-binding domain 22 60 IPR011598 GO:0046983
Ahy14g2871 94 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 24 79 IPR036638 GO:0046983
Ahy14g2871 94 Gene3D - 5 89 IPR036638 GO:0046983
Ahy14g2871 94 CDD bHLH_AtPRE_like 17 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2871 Ahy-Chr14 137271168 137272556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2871 14 92 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G39860 73.750 2.81e-36 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy14g2871 HLH 4.60E-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2871 - - gmx:100796852 145.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2871 14 137271168 137272556 Ahy4g2521 4 122967712 122969025 hybridization
Ahy20g2532 20 133378631 133381053 Ahy14g2871 14 137271168 137272556 PCT
Ahy10g2046 10 108119841 108122538 Ahy14g2871 14 137271168 137272556 PCT
Ahy14g2871 14 137271168 137272556 Ahy20g2532 20 133378631 133381053 PCT
Ahy14g2871 14 137271168 137272556 Ahy10g2046 10 108119841 108122538 PCT