Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2867 ATGGCATTCCCACCACCACCTTCTTCACAAAGTGCTAATAATTTCATCTTCCACAATCATGAACACCAACCAGATCATCATCATCATCATCATCACCAACCCTTCTCTTCTAATTCCCTCAATTCCTTCCCCTCTTTGCCAATTCCTTCCCATCACCACTTCTTAGGTCAACCACACAACACACCCTCTCTCTTTCTCAAGATGGGTTCACACCAATTCTTAGGGATCGAGAATAAGTGCGGCGGCGACGGCGACGACGACCTATCGGACGACGGATTCGGGTTCCAATTTGGGGAGAAGAAAAAGAGGCTGAACATTGAACAAGTGAAAGCACTTGAGAAGAGTTTTGAGTTAGGGAACAAGCTTGAACCTGAAAGAAAGGTTCAACTTGCTAAGGCCCTTAACTTGCAACCGAGACAAATTGCTATTTGGTTTCAGAATCGGAGGGCAAGGTGGAAAACTAAGCAACTTGAAAGGGAATATGAATCTCTTAAGAAGCAGTTTGAAGCATTGAAGGTTGATAATGATGCACTTAAGGTTCAGAATCAAAAATTACATGCTGAGTTACAGGCCCTAATCAAAGGAAAGGAGTATTATTGTGAAGAAGAAGATGGAGCAATAATAAGCAACCTTAATAAGAAAGAAGCGGGAGAGGGTTCATGGAGTAATAATAATAATAATAATGGTTGTAGTGACAATAATAATATCTCATCATCAGACATTAACTTAGATCTCTCAACAACACCAATTATAAACACTAGTCCAGTATCTTCTCAAAATGCCAAAACTACCCTTGAATCCAATAATGATAATTCTCTAAAGCCCAACAACATAATTCAGCTCCTCCAATACTCACCACCATCATCATCAAGACCACAAGGAATTCCTCATCAGGATGAAGGCTTATGCAACATGTTTCATCACCAAATTGATGATCAACAGAATCTGTGGCCCTGGCCTGAACACCAGCCTCATAATAATTTCCACTGA 990 0.4061 MAFPPPPSSQSANNFIFHNHEHQPDHHHHHHHQPFSSNSLNSFPSLPIPSHHHFLGQPHNTPSLFLKMGSHQFLGIENKCGGDGDDDLSDDGFGFQFGEKKKRLNIEQVKALEKSFELGNKLEPERKVQLAKALNLQPRQIAIWFQNRRARWKTKQLEREYESLKKQFEALKVDNDALKVQNQKLHAELQALIKGKEYYCEEEDGAIISNLNKKEAGEGSWSNNNNNNGCSDNNNISSSDINLDLSTTPIINTSPVSSQNAKTTLESNNDNSLKPNNIIQLLQYSPPSSSRPQGIPHQDEGLCNMFHHQIDDQQNLWPWPEHQPHNNFH* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2867 329 ProSitePatterns 'Homeobox' domain signature. 130 153 IPR017970 GO:0000981|GO:0006355
Ahy14g2867 329 CDD homeodomain 100 156 IPR001356 GO:0003677
Ahy14g2867 329 MobiDBLite consensus disorder prediction 252 274 - -
Ahy14g2867 329 Gene3D - 96 164 - -
Ahy14g2867 329 ProSiteProfiles 'Homeobox' domain profile. 95 155 IPR001356 GO:0003677
Ahy14g2867 329 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 1 326 - -
Ahy14g2867 329 Pfam Homeodomain 100 153 IPR001356 GO:0003677
Ahy14g2867 329 SMART HOX_1 98 159 IPR001356 GO:0003677
Ahy14g2867 329 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 326 IPR045224 GO:0003700
Ahy14g2867 329 Pfam Homeobox associated leucine zipper 155 192 IPR003106 GO:0006355|GO:0043565
Ahy14g2867 329 SUPERFAMILY Homeodomain-like 91 157 IPR009057 -
Ahy14g2867 329 MobiDBLite consensus disorder prediction 21 42 - -
Ahy14g2867 329 Coils Coil 147 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2867 Ahy-Chr14 137211213 137214605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2867 40 321 Homeobox Transcription Factor Family AT5G15150 46.667 3.91e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy14g2867 Homeodomain 7.40E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2867 K09338 - gmx:100816097 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2867 14 137211213 137214605 Ahy4g2518 4 122915220 122918463 hybridization
Ahy20g2528 20 133184542 133187464 Ahy14g2867 14 137211213 137214605 PCT
Ahy10g2042 10 107977618 107980472 Ahy14g2867 14 137211213 137214605 PCT
Ahy14g2867 14 137211213 137214605 Ahy20g2528 20 133184542 133187464 PCT
Ahy14g2867 14 137211213 137214605 Ahy10g2042 10 107977618 107980472 PCT