Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2812 ATGGCAATGGAGAATGATGAAGTGAGATTGAGAAAAAGAAGAAGAAGAGTGTGTGAAGAAGAAGGTGAGCTCCAAGAAGCAAGGTATATCAAGAAGAAGAAGAAGCAGCCGCAGCCGCAGCAGCACGAACATTCTAATGTGATCACTACTAAGAGAAGTTCAAAATTTCGTGGGGTTAGCAGACATAGATGGACGGGTAGGTTTGAGGCTCATTTATGGGACAAGCTTTCTTGGAATGTAACTCAAAAAAAGAAAGGGAAGCAAGTTTATCTTGGTGCTTATGATGAAGAAGAATCTGCTGCCAGAGCATATGATTTAGCAGCACTTAAGTATTGGGGAACATCAACTTTTACTAATTTTCCGTTATCAGATTATGAGAAAGAGCTAGAAATAATGCAGACTATGACCAAAGAAGAGTACTTGGCAACTTTAAGGAGGAAGAGTAGTGGCTTCTCAAGAGGTGTATCAAAGTATAGGGGTGTTGCAAGGCATCATCAGAATGGAAGATGGGAAGCAAGGATAGGAAGAGTTTTTGGAAACAAATATCTTTACCTTGGAACCTACAGCACACAAGAGGAAGCAGCACGAGCCTATGACATAGCAGCAATTGAGTACAGAGGAATTAATGCTGTCACCAACTTTGATTTAAGTAATTACATTACATGGTTGAAGCCTTCACACCAAAACTCCCAAGACCCTAAACCTGAAACAGAAGTAGTACTAAACTCTCAAGCACTCACTTCTCCATCCAACTATGCTCCAAATCCAATACAACATTCAAAACCATTGCCCTTTGACAATACCTCTTTCATCAGTCTTGATCACCTGAATTACCCTGAAAATCAAGAAGTCTTTGATAACAAAATGTATCGATTTTCGAGCAGCAAGTCGTCTTCTCCCACGGCTCTTGGCCTTCTCTTTCGCTCTTCGCTGTTTAGGGAATTGGTTGAAAAGAACTCAAACAATGCATGTGGAGATGAACTTGATGAGGAAGTCACAAAAGATCAACAACAAAACGTAGCCAGTGATGATGAACTGGGTGGGATCTTCTGTGATGGCAGTGACAGCATTTCATTTTTCTATGATCCAAACACAAGCGGCTTAGAACTGCAAGAAAGCGATCTCTACTCAATTCTTTGA 1140 0.407 MAMENDEVRLRKRRRRVCEEEGELQEARYIKKKKKQPQPQQHEHSNVITTKRSSKFRGVSRHRWTGRFEAHLWDKLSWNVTQKKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPLSDYEKELEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHQNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSNYITWLKPSHQNSQDPKPETEVVLNSQALTSPSNYAPNPIQHSKPLPFDNTSFISLDHLNYPENQEVFDNKMYRFSSSKSSSPTALGLLFRSSLFRELVEKNSNNACGDELDEEVTKDQQQNVASDDELGGIFCDGSDSISFFYDPNTSGLELQESDLYSIL* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2812 379 SUPERFAMILY DNA-binding domain 156 217 IPR016177 GO:0003677
Ahy14g2812 379 ProSiteProfiles AP2/ERF domain profile. 157 215 IPR001471 GO:0003700|GO:0006355
Ahy14g2812 379 SUPERFAMILY DNA-binding domain 54 123 IPR016177 GO:0003677
Ahy14g2812 379 MobiDBLite consensus disorder prediction 29 48 - -
Ahy14g2812 379 Gene3D AP2/ERF domain 54 123 IPR036955 GO:0003700|GO:0006355
Ahy14g2812 379 Gene3D AP2/ERF domain 156 217 IPR036955 GO:0003700|GO:0006355
Ahy14g2812 379 ProSiteProfiles AP2/ERF domain profile. 55 121 IPR001471 GO:0003700|GO:0006355
Ahy14g2812 379 SMART rav1_2 55 127 IPR001471 GO:0003700|GO:0006355
Ahy14g2812 379 SMART rav1_2 157 221 IPR001471 GO:0003700|GO:0006355
Ahy14g2812 379 PRINTS Ethylene responsive element binding protein signature 197 217 IPR001471 GO:0003700|GO:0006355
Ahy14g2812 379 PRINTS Ethylene responsive element binding protein signature 56 67 IPR001471 GO:0003700|GO:0006355
Ahy14g2812 379 CDD AP2 54 123 IPR001471 GO:0003700|GO:0006355
Ahy14g2812 379 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 10 368 - -
Ahy14g2812 379 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10 368 - -
Ahy14g2812 379 CDD AP2 156 217 IPR001471 GO:0003700|GO:0006355
Ahy14g2812 379 Pfam AP2 domain 54 113 IPR001471 GO:0003700|GO:0006355
Ahy14g2812 379 Pfam AP2 domain 156 207 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2812 Ahy-Chr14 136511359 136514208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2812 25 219 AP2-EREBP Transcription Factor Family AT5G57390 64.103 1.30e-86 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Ahy14g2812 AP2 5.90E-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2812 - - gmx:100779867 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2812 14 136511359 136514208 Ahy4g2469 4 122118970 122121515 hybridization