Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2757 ATGGATTCCGATTATGAATTTCTAGAATCTGTTCAAGAATACCTTCTTGGACATGATTCCAACAACACGGTTGACCTTTTTGACCATAATACCCTCCAATCTCCCTCGCACAACCCCTTACCAAACCCTAAATCCGATATACTTCAAGAACAAGAAAGAGATACAAATGAAAATGAACATGCGCCTCCAACATGGAAGCGTTATAGAGGCGTGAGGCGGCGGCCGTGGGGGAAGTTCGCCGCGGAGATAAGGGATCCGAAGAAGAACGGAGCTAGGGTTTGGCTTGGAACTTATGAGAAGGAAGAAGAAGCTGCTTTGGCATATGATAGAGCTGCTTTTAAATTGCGTGGTCAAAAAGCTAAGCTCAATTTTCCTAATCTTTTTGGCTCTGATTCTGAAAATGTATCCTTAGAAATAATAGAGCCAATCATAAAGATCACAACTTGTAAGGAGAATTTCTCAGATTCTTCATCATCATCATCATCATCATCACTTGCAGGGTCAAAGAGAAAGAGGAACTTAACTCATTTACTAAATCAACTAGCCAAAAATAAGAGCCAAGCCAAAGTTTATGTAGGAGGAAATTAA 588 0.4048 MDSDYEFLESVQEYLLGHDSNNTVDLFDHNTLQSPSHNPLPNPKSDILQEQERDTNENEHAPPTWKRYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYEKEEEAALAYDRAAFKLRGQKAKLNFPNLFGSDSENVSLEIIEPIIKITTCKENFSDSSSSSSSSSLAGSKRKRNLTHLLNQLAKNKSQAKVYVGGN* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2757 195 Gene3D AP2/ERF domain 66 126 IPR036955 GO:0003700|GO:0006355
Ahy14g2757 195 PRINTS Ethylene responsive element binding protein signature 107 127 IPR001471 GO:0003700|GO:0006355
Ahy14g2757 195 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Ahy14g2757 195 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 2 187 - -
Ahy14g2757 195 SUPERFAMILY DNA-binding domain 67 126 IPR016177 GO:0003677
Ahy14g2757 195 SMART rav1_2 67 131 IPR001471 GO:0003700|GO:0006355
Ahy14g2757 195 Pfam AP2 domain 67 117 IPR001471 GO:0003700|GO:0006355
Ahy14g2757 195 ProSiteProfiles AP2/ERF domain profile. 67 125 IPR001471 GO:0003700|GO:0006355
Ahy14g2757 195 CDD AP2 66 127 IPR001471 GO:0003700|GO:0006355
Ahy14g2757 195 PANTHER DNA-BINDING DOMAIN 2 187 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2757 Ahy-Chr14 135823658 135824397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2757 21 130 AP2-EREBP Transcription Factor Family AT2G44840 55.932 3.63e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy14g2757 AP2 5.90E-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2757 K09286 - gmx:548037 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2757 14 135823658 135824397 Ahy14g2757 14 135823658 135824397 ECH
Ahy14g2757 14 135823658 135824397 Ahy4g2420 4 121473918 121474764 hybridization