Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2645 ATGCAGAACGAGGAGGGACAGATCACTGAGCTCTACATTCCTAGGAAGTGCTTCAGCAAACCAGACTCTCTCTTGAAGAAAGAGAACAGGACCGAGGAGTGGGCCCTCGCCAAAACCCAACAGCTCCAAGCCGCTAAGAAAACCAGCTTCCAAACTCGCAAGTTGATTTTTAACAGAGCCAAACACTACTCTAAGGAATACGCCCAACAGGAAAAAGAGCTAATTAGGTTGAAGCGTGAGGCCAAGCTTAAAGGAGGCTTTTATGTCGATCCTGAAGCTAAACTCTTATTCATCATCAGGATCCGTGGTGTCAATGCTATGCACCCTCAGACAAGGAAGATTTTGCAGCTCTTGCGGTTGAGGCAGATCTTTAATGGTGTATTCCTCAAGGTCAATAAAGCAACGATGAATATGCTGCACATTGTAGAGCCGTATGTTGCATACGGGTATCCCAATCTGAAGAGTGTTAGAGAATTAATTTACAAGAGAGGCTATGGAAAAGTTGAGAAGCAGCGAATTGCGTTGACAGACAACGCCATCATTGAACAGGCATTGGGGAAGCACGGAATTATATGCGTTGAAGATCTGATCCACGAGATAATGACCGTTGGTCCACACTTTCGAGAAGCAAACAACTTCCTATGGCCCTTCAAATTGAAGGCTCCATTGGGTGGTTTGATGAAGAAGCGGAATCATTATGTCGAAGGAGGTGACGCAGGTAACAGGGAAGCTTACATAAATGAGCTTATTAGAAGGATGAATTAA 765 0.4471 MQNEEGQITELYIPRKCFSKPDSLLKKENRTEEWALAKTQQLQAAKKTSFQTRKLIFNRAKHYSKEYAQQEKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGVNAMHPQTRKILQLLRLRQIFNGVFLKVNKATMNMLHIVEPYVAYGYPNLKSVRELIYKRGYGKVEKQRIALTDNAIIEQALGKHGIICVEDLIHEIMTVGPHFREANNFLWPFKLKAPLGGLMKKRNHYVEGGDAGNREAYINELIRRMN* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2645 254 SUPERFAMILY Ribosomal protein L30p/L7e 95 254 IPR036919 -
Ahy14g2645 254 TIGRFAM uL30_euk: 60S ribosomal protein uL30 21 254 IPR005998 GO:0000463|GO:0003735|GO:0022625
Ahy14g2645 254 PANTHER 60S RIBOSOMAL PROTEIN L7 20 254 IPR039699 -
Ahy14g2645 254 PANTHER 60S RIBOSOMAL PROTEIN L7-RELATED 20 254 - -
Ahy14g2645 254 Gene3D - 95 199 IPR036919 -
Ahy14g2645 254 Gene3D - 200 254 IPR036919 -
Ahy14g2645 254 CDD Ribosomal_L7_archeal_euk 95 254 IPR035808 -
Ahy14g2645 254 Coils Coil 60 80 - -
Ahy14g2645 254 Pfam Ribosomal L30 N-terminal domain 21 91 IPR012988 -
Ahy14g2645 254 ProSitePatterns Ribosomal protein L30 signature. 114 146 IPR018038 -
Ahy14g2645 254 Pfam Ribosomal protein L30p/L7e 96 146 IPR016082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2645 Ahy-Chr14 133749146 133754641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2645 21 254 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 80.769 4.00e-144 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2645 K02937 - gmx:100500011 405.986