Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2597 ATGGGATTGATAGTTGAGGTTGATAACGTAGACGAGGACGCCGCCGTTTTGGTCCCGCCGCCGAATTTCTCAATGGTGGAGGACTGCATTTTCCGATCCAGTTTCCCCACTCCTTCCAATTTCCCTTTTCTCCAAACCCTAAACCTTCGATCCGTCATATACTTGTGTCCAGAGCCCTATCCGGAAGAAAATCTGGAGTTTCTTCGATCGCAGAACATTCGGCTCTTTCAATTTGGAATCGAGGGGAAGACGGATGTTTCTTTACCTATTCTCAGGGATTCTATTATGGAGGCCCTGAAAGTTTTAATTGATGTGAGAAATCACCCAGTTTTGATTCATTGCAAACGAGGAAAGCATAGAACAGGTTGCCTTGTTGGCTGCTTGAGAAAATTGCAGAATTGGTGCCTATCTTCTGTGTTTGAGGAGTACCAACGATTTGCGGGTGCGAAATCGAGGAACGGGGATTTAACCTTTATAGATAGGTTTGACATTGTAAGCCTGAGGCAGTGCCTTTACAGTATCATCTACCAGTATCAAGGATACGGTTCGAAGAAGCGGCGATTGCTGTATACAGACGAGAACTTGCAGAAGCCCCGACTGGCATCGTTTTAG 612 0.4575 MGLIVEVDNVDEDAAVLVPPPNFSMVEDCIFRSSFPTPSNFPFLQTLNLRSVIYLCPEPYPEENLEFLRSQNIRLFQFGIEGKTDVSLPILRDSIMEALKVLIDVRNHPVLIHCKRGKHRTGCLVGCLRKLQNWCLSSVFEEYQRFAGAKSRNGDLTFIDRFDIVSLRQCLYSIIYQYQGYGSKKRRLLYTDENLQKPRLASF* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2597 203 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 12 186 - -
Ahy14g2597 203 Pfam Tyrosine phosphatase family 17 165 IPR004861 -
Ahy14g2597 203 Gene3D Protein tyrosine phosphatase superfamily 16 166 IPR029021 -
Ahy14g2597 203 PANTHER TYROSINE-PROTEIN PHOSPHATASE 12 186 - -
Ahy14g2597 203 CDD PFA-DSP_Siw14 17 163 - -
Ahy14g2597 203 ProSiteProfiles Dual specificity protein phosphatase domain profile. 22 187 IPR020422 GO:0006470|GO:0008138
Ahy14g2597 203 ProSitePatterns Tyrosine specific protein phosphatases active site. 112 122 IPR016130 GO:0016311|GO:0016791
Ahy14g2597 203 PRINTS Plant and fungal dual specificity phosphatase signature 90 104 IPR020428 GO:0016791
Ahy14g2597 203 PRINTS Plant and fungal dual specificity phosphatase signature 73 87 IPR020428 GO:0016791
Ahy14g2597 203 PRINTS Plant and fungal dual specificity phosphatase signature 54 67 IPR020428 GO:0016791
Ahy14g2597 203 PRINTS Plant and fungal dual specificity phosphatase signature 17 34 IPR020428 GO:0016791
Ahy14g2597 203 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 17 150 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2597 Ahy-Chr14 133093876 133096406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2597 1 199 Protein tyrosine phosphatase (PTP) family AT3G02800 69.347 4.73e-104 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2597 K18045 - gmx:100787713 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2597 14 133093876 133096406 Ahy4g2270 4 119102145 119104663 hybridization