Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2586 ATGAGGTCCTTGATTTTTAGGTATGATCTCATCAAGTGTATCAATGCTGGTCCAGCGCATAAGGTGTGGAAGCTCAAAGTACGTGTCATTAGACTTTGGACCGTTTCTCAATTTGCAAAATCTGGAATGAAGGCACCTATTGAGATGGTTGTCCTTGATGAAGAGGGGGATACAATTCAATGCACTGTAAAAGACATATTTGTTCCTATCTTCGAGGGCTTACTCGCTGAGGGCAACGTGTATGTGGTCACTAATTTTGGAGTTGCTTTGAATACCATCAAGTTCAAGCCTACTAGACACGAATTTAGAATCCACTTCAAGAGGGACACGATTGTGCATCCGGTACAAGATTCTTCATTTCCATTGAACAGATTCAATTTTGTTCCGTTCAAAACAATTCAATCAGAGTCTAAAGAAGATGGTTATTTAGTTGATGTGATAGGTCAGCTTGCCTCTAAGGGTAACTTGGTCGAATTCACCCGGGACGGGAAGCCGTCAAGTTATATCACCATAGAACTTGATGATCTTGAGGGTGGACAGAAATTAAGGGTAACATTGTGGCAGTCTTTTGCTTTTGATTTGCTCAAATATCTGGAGGAACACCCGTGTCTTACCTATGTTGTTATTCTCCAAATGGGCAAGATGAAATTTTATACTGGGGTCATGGGTGTTTCCAACACAAACTACAATTTGAAACTGTTTATCAATGTTGAGTTTCCAGCTGCCAGGGATTTCTTTGCGAGGGTAAACAAATTGGATCCTGTTGACGGACAAGGCATAATGCCGCTGGTCTGTGATCAACCTGTTTCAGTTGAGAAAGACTTTTTGCGTCTGTCAGTCTACAAAACAATTGCCGAGATAAAGGAGTATAATCAGGCGGGACGATTAAAGAAGTTGAGACCGAGTTTGGTTGGTGGTACAAAGGATGTAAGAAGTGTCGTCGTGGCTTAA 951 0.4154 MRSLIFRYDLIKCINAGPAHKVWKLKVRVIRLWTVSQFAKSGMKAPIEMVVLDEEGDTIQCTVKDIFVPIFEGLLAEGNVYVVTNFGVALNTIKFKPTRHEFRIHFKRDTIVHPVQDSSFPLNRFNFVPFKTIQSESKEDGYLVDVIGQLASKGNLVEFTRDGKPSSYITIELDDLEGGQKLRVTLWQSFAFDLLKYLEEHPCLTYVVILQMGKMKFYTGVMGVSNTNYNLKLFINVEFPAARDFFARVNKLDPVDGQGIMPLVCDQPVSVEKDFLRLSVYKTIAEIKEYNQAGRLKKLRPSLVGGTKDVRSVVVA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2586 316 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT B-LIKE 19 284 - -
Ahy14g2586 316 Pfam Domain of unknown function DUF223 48 138 IPR003871 -
Ahy14g2586 316 PANTHER REPLICATION FACTOR A 1, RFA1 19 284 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy14g2586 316 Gene3D - 119 253 IPR012340 -
Ahy14g2586 316 SUPERFAMILY Nucleic acid-binding proteins 125 248 IPR012340 -
Ahy14g2586 316 CDD RPA1_DBD_B_like 145 245 - -
Ahy14g2586 316 CDD RPA1_DBD_A_like 24 112 - -
Ahy14g2586 316 Gene3D - 11 118 IPR012340 -
Ahy14g2586 316 SUPERFAMILY Nucleic acid-binding proteins 18 119 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2586 Ahy-Chr14 132892494 132896084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2586 18 242 Core DNA Replication Machinery Family AT2G06510 27.848 3.25e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2586 - - aip:107647757 555.444