Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2550 ATGGGGCAGAATTACTATCCCCCTAATGGACTTCCAATTGGTGCTGAACTCACAGTTCCTTTGTTATGTGCTTGTCCAACAGAAAATCAAACTTCAACAGGTGTCACTTCCTTATTGGTTGATTTGATCAACTATGGTCACACCTTGAAGTCCATAGGAGAATCTTATGGTGTTGGTGAACAAAGTATGTTAGAGGCTAATAAGCCACAAAGTAAAAATAGTAGCAGCTTCACCCTCTTGGCCTTAACTCCTATCTTGGTTCCTCTAAGAGGAAAGAGTTGCAAAGAGGATCCAAATAGTTTCTATTGTAACTGTTCTAAGGAATTCCTTGCTGATGGAAGCTTAAAGGGGATTTATTGTGATGAGTCTGATGGTGTTGGCATTGGTGTAGGCTTTCTTTGTTTGTTTCTCTTGGGTTATAAACTATACCAATACATACAGAAAAAGAGAGAAAGGATTCACAAGGAAAAGCTATTCAAACAGAATGGTGGCTACTTGTTACAAGAGAAAGTGTCATCATCACATGGAAATGGATCCCAAAAGGTAATAATAAAGCTTTTCACAGCTGAGGAGCTTCAAAGAGCAACAGATAACTACAACTGGAGCAGGTTTCTTGGTCAAGGTGGATATGGAAAAGTCTACAAAGGAATGCTACCAGATGGAACCATAGTAGCTGTTAAGAGATCTAAGGAGATTGAGAGGAACCAGATTGAGACTTTTGTCAATGAAGTTGTCATTTTATCACAGATTAATCACAGGAACATTGTGAAGCTCTTGGGCTTCTGTCTTGAGACAGAAGCACCATTACTAGTCTATGAGTTCATTCCAAATGGAACACTTGCACAACATATTCATAGCAAACCCCATGAATCATCTTCACCACTTTCATGGGATAGCCGGCTTGGAATCGCATGCGAGGTAGCCGGAGCAGTGGCTTATATGCATTCTTCAGCTTCAATTCCCATCTTCCATAGAGATATCAAACCTACTAACATACTCTTAGATAGTAACTATAGTGCAAAAGTGTCTGATTTTGGAACATCAAGATCATTGCCACAAGACAAGACTCACTTGACAACACAAATAGGAGGAACTTTCGGATACATCGACCCTGAATATTTCCAATCTAGTCAATTTTCGGATAAGAGTGACATGTATAGTTTTGGAGTTGTGCTTGTTGAAATCATAACTGGGAAGAAGCCGTTTCGTTTATAG 1215 0.3951 MGQNYYPPNGLPIGAELTVPLLCACPTENQTSTGVTSLLVDLINYGHTLKSIGESYGVGEQSMLEANKPQSKNSSSFTLLALTPILVPLRGKSCKEDPNSFYCNCSKEFLADGSLKGIYCDESDGVGIGVGFLCLFLLGYKLYQYIQKKRERIHKEKLFKQNGGYLLQEKVSSSHGNGSQKVIIKLFTAEELQRATDNYNWSRFLGQGGYGKVYKGMLPDGTIVAVKRSKEIERNQIETFVNEVVILSQINHRNIVKLLGFCLETEAPLLVYEFIPNGTLAQHIHSKPHESSSPLSWDSRLGIACEVAGAVAYMHSSASIPIFHRDIKPTNILLDSNYSAKVSDFGTSRSLPQDKTHLTTQIGGTFGYIDPEYFQSSQFSDKSDMYSFGVVLVEIITGKKPFRL* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2550 404 Pfam Protein kinase domain 201 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy14g2550 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 322 334 IPR008271 GO:0004672|GO:0006468
Ahy14g2550 404 ProSitePatterns Protein kinases ATP-binding region signature. 205 227 IPR017441 GO:0005524
Ahy14g2550 404 SUPERFAMILY Protein kinase-like (PK-like) 177 403 IPR011009 -
Ahy14g2550 404 SMART serkin_6 199 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy14g2550 404 Gene3D Phosphorylase Kinase; domain 1 165 274 - -
Ahy14g2550 404 Gene3D Transferase(Phosphotransferase) domain 1 275 404 - -
Ahy14g2550 404 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 402 IPR045274 GO:0007166
Ahy14g2550 404 ProSiteProfiles Protein kinase domain profile. 199 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy14g2550 404 PANTHER LYSM TYPE RECEPTOR KINASE 1 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2550 Ahy-Chr14 132413455 132414870 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2550 125 401 Receptor kinase-like Gene Family AT1G16130 58.993 1.15e-112 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Ahy14g2550 Pkinase 1.20E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2550 - - ahf:112743231 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2550 14 132413455 132414870 Ahy4g2238 4 118578705 118581187 hybridization