LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy14g2504	ATGTTAACAATATTTACTAAACACAACACTGCTAAAAAAAATATACACACCACAAAACACAATCTGTTATTACACTTTCCCATATACATGGCAATGGCATCTTTAGCTGCTGAAGCCTCTTCTTTCTCCACTCCTCCTTCACCAAGATCATGGACCTATCACGTGTTCTTGAGTTTCCGGGGTGAAGACACTCGCACAGGCTTCACTGATCATTTATGTGCCTCGCTTGAAAGGAAGGGAATCACAACTTTCAGGGATGACAAAGACCTTGAGAGAGGTCAAGTTATCTCTCTTGAACTTCTCAGAGCAATTCAAGAGTCCATGTTCGCGGTCGTTGTTCTCTCGCCAAACTATGCTTCCTCTGCTTGGTGCTTGGATGAGCTTCAAAAGATTGTTGAGTGCAAACACAACCTGGGGCTACAGATTGTGCCTGTCTTCTATGGTGTTGAGCCCTCTGATGTGCGACACCAAAAAGGAACCTTTGATGAAGCTTTCAGAAAACATGAACACAGATTTGGTGAAGGCAGTGAGAGGGTTAGAAGGTGGAGAGATGCTTTCGCACAAATTGCTAGTTATTCTGGTTGGGATTCCAAACATCAACTTGAGGCAAGATTTGTGGAAAGCATTTCTGAACACATACATAGAAAGCTAATTCCGAAATTGCCATCTTGCACTAAGAATCGTGTTGGGATTGCTTCAAGGTTGGAGGAAGTGATTAATCTCATAGGTATTGGGTTGAATGATGTTCGCTTTTTAGGGATATGGGGAATGGGTGGCATAGGAAAGACAACTATAGCGAGAGCAGTATACGAAGCCATCCGAGGTGAATTCAAAGTTTGTTGCTTCATGCGAAATGTTAGAGAGTTGTCTGCAAAAAATGGTTTTGTTCAGTTGCAAAGAGACCTTCTTGCATGTCTAAACATAAATAGCTATTTTCATGACATAGAAGATGGAAAATCAATGATAAAAAGTGCTTTGTGCAATAAGAAAGTTCTTCTTGTTCTTGATGATGTAAGTGAGCTAAAGCAATTAGAGAATTTAGCAGAGAATCAAGATTGGTTTGGACCGGGAAGTAGAATAATAATCACAGCCAGAGATATGCACTTGCTAGATATACATGGAGTCCATGGAACTTATGAAGTTAAAGGGTTAGATCAAGAAGAAGCTTATAATCTGTTTTGTTTGAAAGCCTTTAAACAACTTGAACCTAAAGAAGGATATTCTTCTCTGGGTAAAGAAGTTGTGAAATATACTAAGGGTCTTCCTTTGGCAGTTGAGGTTTTAGGTTCCTATCTGTATAGAAGAAATGCTGAGTTTTGGCATAGTACCATTAGAGAAATAATGAATTTTCCACATTTTGAAGTTCTCAATGCATTGAAAATAAGCTACAATCATTTGATGCCAACCGAGAAGAATATTTTTCTTGATATTGCTTGTTTCTTCAAAGGAATGGAAAAAGATGAGGCAATACATATATTAAGAATGTGTGATTTTTGCGTTGGAGTTGGAAGTGATATTGGAAGCGGAATTGTTACATTGATTGATAAAGCTTTGGTAACTTTAGATCAGAATAATAAGTTAGAAATGCATGATTTGCTTCAAGAAATGGGGAGGCATATTGTGTATAAAGAATCTCCATGTAACCCAGGCAAGCGTAGCAGGCTGTGGTCTAAAGATGACATTCATCAAGTGTTGACAAATGATCTGGGAACAGAAGCAATTCAAAGTATGGTTCTAAGCTTTGGACATGATAAATTTTATTGGTTTCGGAGTAAGCCATTCTCAGCACAATGGAGCATTGAAGCCTTCTCAAAGACAACACAGTTAAGATATCTCAGTTTACCATACATGGAACTTCCCCTTGGCCTCAACCACTTCCCTAGTTCAGTAAGAGTTCTGCATTGGGATTTTTGTCCTTTGGAAACTCTCCCCTTGTTAAATCAACAATATCAAGCTGTTGAAATCAAAATGCAACGTAGCAACCTTGAACAAGTTTGGCATGGCAAAAAGTTTTTCGAAAAGCTGAAGTACCTGGATTTGAGTAGCTCCCGGAACCTAAAGCAGACACCTGATATTTCTGGGGTTCCCATTCTTGAAACATTTGATCTCCAAGGTTGTGATAGCCTAACTGAGGTTCACATATCCCTCGTACACCACAAGAACCTTGTTCACTTAAATCTAAGCTACTGTGAAATGCTTAAAACTCTTCCAGGTAAATTGGAGATGAGTTCCTTGAAGGAGCTAATCATTGAGCATTGTGAGAGTTTCGAAAATCCCCCGGAGTTTGGAGAATGCATGAGAAAATTGTCAAAGCTTTCTCTAAGCGGAACTCCTATAGGAAAGTTACCCTCATCACTTGGAAATTTAGTTGGCCTTGAAGATTTGAACATAAAGGGTTGTGGAAAACTTGATTCTGTTCCTGATACCATTCATAGGTTAAAGTCCCTCAAGAACTTGGATCTTGGCTCTTGTTTTAACCTTCATGGATTACCATCTTCAATTTCAAGCCTCCCTTTGTTGAGTAATCTAAATTTGAGTGGATGTTACCAGAGTGAAATATCTTTCTCTCATGATCTATTTTGCTACTTCCCATCATTGATGCATTTGGATCTAAGTGGTCACTGGTTTGCTAATATCCCAATAAGCATTCATGAACTTTCCAAGCTTAGGTCCCTTAAGCTAAATAGATGTGGTTGTCTTCAGTTTCTTCCAAAACTTCCATCTAGTATTAGAGAATTAGAAGCATATGGGTGTAGATCACTGAACATACTTGAATCCAATGTTTTGTCAACCATTTGCACTGCCTTTAAATCTTCTAGTAGCCAGGATCAAGAAAATCAAGGTGTGGTCTTGGAAATGCTGATCCCAAGTGCCAAAATTCCATCTTTGTTTGTCAATTATTCTCTGAATGGTAATGATGCAGCACAAGCAGTAGTCCCATATCCAAGTGATTGCCGTCTGAATAAAAATTTAAAGGGTATTGCAGTATGTTTCCTGTTTTATACAAAGTTTTGGGGATTTGATAAATCAGTGAAGTTGAATTTGTCTGTTAGCAATGGTAATAGGTGCATCATTCCTTGGAGAACATATAGAATGTGTGATGGTTATCACCTTTACATTCTCTGCTTGACCAATGATTACTTCAGGGGAGAATTTCACCGAGATATGGGGTTTAAACTATTGCTTCGGCCGGAGGTTGAGTATGGGGAATTTGATTCTGAAGAGTTCGAATATCTTCCTTGTTATCATGCCAAAGTATTGAGCACTGGCTGGACATGCATTGAGGATATTGAAGATTTGAACAAAAGTGAGATTGAAAGGCAAAAGAATGAAAGACAAAGTCTGTTTGACTTGAACAAAAGCATTGAGATAATGGATATATGTGAGACAAACAAATTTGAAGATAATGTGAGTGAACTGAACAACTTTGGCAGGGAAGAAAGTTTTTGA	3450	0.3846	MLTIFTKHNTAKKNIHTTKHNLLLHFPIYMAMASLAAEASSFSTPPSPRSWTYHVFLSFRGEDTRTGFTDHLCASLERKGITTFRDDKDLERGQVISLELLRAIQESMFAVVVLSPNYASSAWCLDELQKIVECKHNLGLQIVPVFYGVEPSDVRHQKGTFDEAFRKHEHRFGEGSERVRRWRDAFAQIASYSGWDSKHQLEARFVESISEHIHRKLIPKLPSCTKNRVGIASRLEEVINLIGIGLNDVRFLGIWGMGGIGKTTIARAVYEAIRGEFKVCCFMRNVRELSAKNGFVQLQRDLLACLNINSYFHDIEDGKSMIKSALCNKKVLLVLDDVSELKQLENLAENQDWFGPGSRIIITARDMHLLDIHGVHGTYEVKGLDQEEAYNLFCLKAFKQLEPKEGYSSLGKEVVKYTKGLPLAVEVLGSYLYRRNAEFWHSTIREIMNFPHFEVLNALKISYNHLMPTEKNIFLDIACFFKGMEKDEAIHILRMCDFCVGVGSDIGSGIVTLIDKALVTLDQNNKLEMHDLLQEMGRHIVYKESPCNPGKRSRLWSKDDIHQVLTNDLGTEAIQSMVLSFGHDKFYWFRSKPFSAQWSIEAFSKTTQLRYLSLPYMELPLGLNHFPSSVRVLHWDFCPLETLPLLNQQYQAVEIKMQRSNLEQVWHGKKFFEKLKYLDLSSSRNLKQTPDISGVPILETFDLQGCDSLTEVHISLVHHKNLVHLNLSYCEMLKTLPGKLEMSSLKELIIEHCESFENPPEFGECMRKLSKLSLSGTPIGKLPSSLGNLVGLEDLNIKGCGKLDSVPDTIHRLKSLKNLDLGSCFNLHGLPSSISSLPLLSNLNLSGCYQSEISFSHDLFCYFPSLMHLDLSGHWFANIPISIHELSKLRSLKLNRCGCLQFLPKLPSSIRELEAYGCRSLNILESNVLSTICTAFKSSSSQDQENQGVVLEMLIPSAKIPSLFVNYSLNGNDAAQAVVPYPSDCRLNKNLKGIAVCFLFYTKFWGFDKSVKLNLSVSNGNRCIIPWRTYRMCDGYHLYILCLTNDYFRGEFHRDMGFKLLLRPEVEYGEFDSEEFEYLPCYHAKVLSTGWTCIEDIEDLNKSEIERQKNERQSLFDLNKSIEIMDICETNKFEDNVSELNNFGREESF*	1150

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy14g2504	1149	SMART	till_3	52	192	IPR000157	GO:0007165
	Ahy14g2504	1149	Gene3D	-	218	376	IPR027417	-
	Ahy14g2504	1149	Gene3D	Ribonuclease Inhibitor	593	758	IPR032675	-
	Ahy14g2504	1149	Gene3D	Ribonuclease Inhibitor	759	948	IPR032675	-
	Ahy14g2504	1149	Pfam	TIR domain	53	223	IPR000157	GO:0007165
	Ahy14g2504	1149	Gene3D	-	47	217	IPR035897	-
	Ahy14g2504	1149	PRINTS	Disease resistance protein signature	325	339	-	-
	Ahy14g2504	1149	PRINTS	Disease resistance protein signature	418	432	-	-
	Ahy14g2504	1149	PRINTS	Disease resistance protein signature	251	266	-	-
	Ahy14g2504	1149	PRINTS	Disease resistance protein signature	811	827	-	-
	Ahy14g2504	1149	Pfam	NB-ARC domain	248	450	IPR002182	GO:0043531
	Ahy14g2504	1149	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	213	477	IPR027417	-
	Ahy14g2504	1149	Gene3D	-	383	467	IPR042197	-
	Ahy14g2504	1149	ProSiteProfiles	TIR domain profile.	51	213	IPR000157	GO:0007165
	Ahy14g2504	1149	SUPERFAMILY	"Winged helix" DNA-binding domain	454	565	IPR036390	-
	Ahy14g2504	1149	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	49	1106	-	-
	Ahy14g2504	1149	SUPERFAMILY	Toll/Interleukin receptor TIR domain	43	195	IPR035897	-
	Ahy14g2504	1149	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	49	1106	IPR044974	GO:0006952
	Ahy14g2504	1149	SUPERFAMILY	L domain-like	591	923	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy14g2504	Ahy-Chr14	130620845	130625394	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy14g2504	46	870	WRKY Transcription Factor Family	AT4G12020	30.071	3.43e-100	348

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy14g2504	-		-	aip:107635063	2315.81