LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy14g2492	ATGGCATCCGGGTCCTCTTTTGGTTCAATTCCACTGCCAACAAGAGCATGCACCTATCACGTGTTTTTGAGTTTCAGGAGTGAAGACACTGGAAAATTCACTATCCATCTCTATAACACCCTCAACAGAAAGGGAATCACAACCTACAGAGATGATAACAAACTTCGCAAAGACGATGTTATTTCAGATGAACTCCTGAAAGCAATTGAACAATCGATGTTTGCAGTCATTGTTTTCTCACCAGACTACGCTTCCTCCAGTCAGTGCTTGGATGAGCTCCAAAAGATCTTGGAGTGCAACAACAAACTGGGGCTACATATCCGGACAGTGTACTACGGTGTGGAGCCTAGTGATGTGAGGCACCAAAGAGGAACCTTTGAGAAAGCTTTCAAAAAACACGAAGAGAGACATGACCGTGAGAAGGTCAAAAGATGGAGAGATGCGCTAACACAAGTTGCTGCTCTTAAAGGTTGGACCTCCAAAAATCAGGACGAAGCAGGACTTGTGAAAAATATTGCTCAACATATATTTGAAATATTGATTTCTAAGTTGCCATCTTCAATGAAGAATTTTGTGGGGATTAATTCAAGAGTGGAACAAGTGATTACTCTAATTGGCCTTGGATTGAATGATGTTCGCTTTATAGGCATATGGGGAATGGGTGGCATGGGTAAGACCACTATTGCTAGAGCAGTCTTTGAAACCATTCGATATAATTTTGAAGTTACTTGCTTTCTTGCCGACGTTAGGGAGCAATGCGAGAAAAAAGATATTACTGACATACAAAAGGAACTTCTTAAACAAATGAATATAAGTTCAAATGCTGTTCATAATAAGTATGATGGGAGGACAATAATTCAAAACTCTTTACGTCTCAAAAAGGTACTTCTTGTTCTTGATGATGTAAATCATGAAAAACAATTAAAGGATTTGGCTGGGGAGCAAGATTGGTTTGGTCCTGGAAGCAGAATAATAATTACAACTAGAGACTTAATGGTGCTAAAGGAAGAGGTGCATAAAACTTATAACGTTGAAGGGTTAATGGAAAGTGAAGCCCTTAACCTCTTTTCTTTAGAAGCTTTTAACCTGCCAAAACCTTCAGAAGAGTTTTTGGAGTTGTCCAAAGAAGTGGTCAAATACAGCGGTGGTCTCCCATTGGCACTTAAAGTATTGGGTTCCTATCTTAATGGTAGAGGTATTGAGGTTTGGCATAGTGCTATTGAAAAAATAAAGCATTTTTCACATTCTGAAATTATTGATGTATTGAAAATAAGCTATGATGGTTTAGATGATATGGAAAAAGATATTTTTCTAGATATTGCTTGTTTCTTTAAAGGATATCAGATAGGTGATGTAACAAGGAAATTAAAAGGATGTGGTTATCAGGTTGAAATTGGTCTTGATATTTTGATTAACAAATCATTGGTCACTATAAATAAATATGATCAATTGGTGATGCATGATCTGGTTGAAGAAATGGGCAAACAAATTGTAATTCAAGAATCTCCAAATGATCCTAGTAAGCGTAGCAGATTGTGGTGTTACGAGGATCTTAATTCTGTACTTGCTCAAAAGAGGGGAACTGAAGCAATTCAAAGTATAGTGCTACACTCAAGTTATGAGGAGCATTTGAGATTTGAAGCCTTCTCCAAACTAAAGCTGTCAAAACTTCTCATATTATGTGGTGTGGAAGTGGAAGTGGAACCTCCATCCGACCTTCCTTGCCTTCCTAGCACATTAAAAGTTCTGCACTGGTGGAGATGTCCTTTGAAAACACTACCCCTTGCAGAAACAGAACATGAATTTGCTGAAATTGAACTACGATTTAGCAGAATTGAGGAACTTTGGCTTGGGAAAAAGTTTCTTGGAAACCTGAAATACTTGAATTTGAGTCATTCATGGTATTTAAAGGAAACACCTGACTTTTCTGGGACTCCTATTCTTGAAACACTTATTCTTGGTGACTGTCCAGACCTCAGAGAGGTTCATCCATCCCTTGTACTACATGAGAATCTTGTTCTGTTGGACTTAAGCAAGTGTATAAGTCTTAAAACTTTTCCGGGAATACTGTATATGACATCCCTCAAGGAGTTAATTCTAAAGGACTGCCGGAGTTTTGAAAATAGACCAGAATTCGGGGAGTGCATGAAACAGTTATCCAGGCTATGTTTAGAGGGAACGGCTGTGAGGGAATTGCCTTCCTCACTTTTTCGCCTTCCCATCACTATCAATAAGAGAAAGTCTAGGGAGCCAGCACTTTTATTAAATTCTGGCCAGCACTTAGCCAGTAAAAGAAAAATAAGTAGTTCTCTATCATTAGATGAAATCTCGCACCATTAA	2340	0.3842	MASGSSFGSIPLPTRACTYHVFLSFRSEDTGKFTIHLYNTLNRKGITTYRDDNKLRKDDVISDELLKAIEQSMFAVIVFSPDYASSSQCLDELQKILECNNKLGLHIRTVYYGVEPSDVRHQRGTFEKAFKKHEERHDREKVKRWRDALTQVAALKGWTSKNQDEAGLVKNIAQHIFEILISKLPSSMKNFVGINSRVEQVITLIGLGLNDVRFIGIWGMGGMGKTTIARAVFETIRYNFEVTCFLADVREQCEKKDITDIQKELLKQMNISSNAVHNKYDGRTIIQNSLRLKKVLLVLDDVNHEKQLKDLAGEQDWFGPGSRIIITTRDLMVLKEEVHKTYNVEGLMESEALNLFSLEAFNLPKPSEEFLELSKEVVKYSGGLPLALKVLGSYLNGRGIEVWHSAIEKIKHFSHSEIIDVLKISYDGLDDMEKDIFLDIACFFKGYQIGDVTRKLKGCGYQVEIGLDILINKSLVTINKYDQLVMHDLVEEMGKQIVIQESPNDPSKRSRLWCYEDLNSVLAQKRGTEAIQSIVLHSSYEEHLRFEAFSKLKLSKLLILCGVEVEVEPPSDLPCLPSTLKVLHWWRCPLKTLPLAETEHEFAEIELRFSRIEELWLGKKFLGNLKYLNLSHSWYLKETPDFSGTPILETLILGDCPDLREVHPSLVLHENLVLLDLSKCISLKTFPGILYMTSLKELILKDCRSFENRPEFGECMKQLSRLCLEGTAVRELPSSLFRLPITINKRKSREPALLLNSGQHLASKRKISSSLSLDEISHH*	780

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy14g2492	779	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	16	738	IPR044974	GO:0006952
	Ahy14g2492	779	SUPERFAMILY	L domain-like	533	740	-	-
	Ahy14g2492	779	Gene3D	Ribonuclease Inhibitor	511	766	IPR032675	-
	Ahy14g2492	779	Gene3D	-	182	345	IPR027417	-
	Ahy14g2492	779	SUPERFAMILY	"Winged helix" DNA-binding domain	416	522	IPR036390	-
	Ahy14g2492	779	SMART	till_3	18	155	IPR000157	GO:0007165
	Ahy14g2492	779	Pfam	TIR domain	19	186	IPR000157	GO:0007165
	Ahy14g2492	779	PRINTS	Disease resistance protein signature	690	706	-	-
	Ahy14g2492	779	PRINTS	Disease resistance protein signature	289	303	-	-
	Ahy14g2492	779	PRINTS	Disease resistance protein signature	381	395	-	-
	Ahy14g2492	779	PRINTS	Disease resistance protein signature	214	229	-	-
	Ahy14g2492	779	Gene3D	-	346	430	IPR042197	-
	Ahy14g2492	779	SUPERFAMILY	Toll/Interleukin receptor TIR domain	15	158	IPR035897	-
	Ahy14g2492	779	Gene3D	-	16	181	IPR035897	-
	Ahy14g2492	779	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	179	440	IPR027417	-
	Ahy14g2492	779	ProSiteProfiles	TIR domain profile.	17	180	IPR000157	GO:0007165
	Ahy14g2492	779	Coils	Coil	595	615	-	-
	Ahy14g2492	779	Pfam	NB-ARC domain	210	420	IPR002182	GO:0043531
	Ahy14g2492	779	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	16	738	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy14g2492	Ahy-Chr14	130363611	130369186	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy14g2492	19	739	WRKY Transcription Factor Family	AT4G12020	30.229	9.39e-86	296

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy14g2492	-		-	ahf:112744165	1527.3