Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2485 ATGGGGTTCCCCGTAGGCTACACGGAAGTCCTCGTCCCAAACATCTTCCTCCGCCTCCTCACCTTCCTCGCCGCCCTCCGAAACCTCGTACTCTCCCTCTTCCGCCTCCTCGGCCTCTCCGAACTCCTCGACACTACCACCACCGACCCCTACCCTCTCTCTTGGACCCAGGCCCACCAGGCCCAATTCCGGCCCACCACCACCACCACCACAACCACCATCCCTTCCCTCTCCGCTATCCTCATCCGCGAATTCCTCCCCGTCATGAAATTCAGCGACCTAGCCGGCGCCGGAGATTTCATTCCGGCCACGACGGAGAACGGATGCGCTGTTTGCTTGAGCGAATTCTCCGGGGAAGACGAGATCAGGTGTATGGCGAACTGCAGACACGTGTTCCATCGCGGTTGCGTGGACCGTTGGATGGACCACGATCAAAGGACTTGCCCTCTCTGTAGGACTCCTTTCGTTCCCGATCACAAGGTGAACGAGTACAACCAACGCCTCTGGGAAGCTTCTGGAGTAGCGGAATTCTACGCAGATTAA 543 0.5875 MGFPVGYTEVLVPNIFLRLLTFLAALRNLVLSLFRLLGLSELLDTTTTDPYPLSWTQAHQAQFRPTTTTTTTTIPSLSAILIREFLPVMKFSDLAGAGDFIPATTENGCAVCLSEFSGEDEIRCMANCRHVFHRGCVDRWMDHDQRTCPLCRTPFVPDHKVNEYNQRLWEASGVAEFYAD* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2485 180 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 178 - -
Ahy14g2485 180 ProSiteProfiles Zinc finger RING-type profile. 109 152 IPR001841 -
Ahy14g2485 180 SUPERFAMILY RING/U-box 93 161 - -
Ahy14g2485 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 157 IPR013083 -
Ahy14g2485 180 SMART ring_2 109 151 IPR001841 -
Ahy14g2485 180 Pfam Ring finger domain 109 152 IPR001841 -
Ahy14g2485 180 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2485 Ahy-Chr14 130227491 130228545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2485 1 175 C3H Transcription Factor Family AT1G63840 46.023 5.99e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2485 K16281 - gmx:100813224 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2485 14 130227491 130228545 Ahy4g2197 4 117496699 117497717 hybridization
Ahy14g2485 14 130227491 130228545 Ahy12g0095 12 1963414 1964418 PCT
Ahy14g2485 14 130227491 130228545 Ahy2g0145 2 1618998 1619713 PCT
Ahy12g0095 12 1963414 1964418 Ahy14g2485 14 130227491 130228545 PCT
Ahy2g0145 2 1618998 1619713 Ahy14g2485 14 130227491 130228545 PCT