Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2481 ATGATGTGTAGTGGTGAGCCTTTGGATTTGTATAAGCTATTCATGGTGGTGAAGGAGAAAGGTGGCTATGATGCTGTTTGTAAGAATATGCTGTGGGATTTGGTTGCGGAAGAATATGGTTTAGGTTTAAATGTTGGTTCATCTATTGAACTTGTTTATAGTAAGCACTTGAGTACACTAGAGACATGGCTGAAGAATGTTGCTGATAGTAAGTTCCCTGAGTGTGGTTTAATGGATGATAGGGTTAGTTTTGGTAAGAAGTTGATGGAGGTGCAGGCTGATTTCTTGTTAGATGTTTATAGCGAGGAAGGTGCAGGGGATAAAATTAAGACAGCATGTGATTTCGTGGATGGAAGGAAGTTGTGTGGAACTAATAGGGTTAGGGGATTGAATCCTGAGCTCAGCGGTGCAAAGAAAATTGTTGATTTGAATGCACTGGACCATAAGATGAATGGGCCTAGTATTGGAAGCTTTTGCAGCAATAACTTTTCAAATAATTCAAGTGATATACAGAACCATTTGAATGAAATTAAGACATCAACAGTGGACATATCTGATGAAGCAAACATAATGCCTACATTGTCGGAAGAAGGTGATAGTTGTGATAAAAATGATGGTCATGACGACGACGACGATGTGATGGTATTGGATCCATCCGATAGTTGTGATAAAAATGATGGTCATGACGACGACGACGACGATGTGATGGTATTGGATCCATCCACTGTTAATAAAGAGAGCTTTGGTCGAAAGAGGAAGAGAGAGTCTATGTCTGAAATGCTAAGCTGGCTTACTGGTATTGCTAAGAATCCTTGTGATCCTGCAGTTGGTTCAATGCCCGAAAAGTCAAAGTGGAAGTCTTATGGTAGTGAGGAGATTTGGAAGCAGGTTTTGCTGTTTCGGCAAGCCACCTTTTTTAGCAGTGATCACGTCAGTTGGCAGAAGATGCATCCTTGCATGTATGATGATCAGGTTGGGGCAAACTACAACCTTAGAGAGAGGTTGAAATCTGACAAGAATTTAACTTGTGGTGTCTCTTCAAATATGAGAGGAATACAGGGAGGTTCCGAGAGAAACCCAAGTCCTCATTCAGAAGTGGAGAAACTGTTACTTGACCAATGTAGCATGGTGCCCATTCCTGTTGGGCCATCCCATCAAGCTGAAGTGCCCGAATGGACTGGTGTGGCAATTGAAAGTGATTCCAAGTGGTTGGGAAGCCAAATATGGCCATCAGCAGAGATAAAGTCCAAAGTCATAGAAAGAGATCCTATCGGAACAGGAAGGAAAGATTCATGTGGCTGTGAAGTACAAGGTTCTGTTGAGTGTGTCCGGTTCCACATTGCTCAGAAAAGGGCTAAAGTTAAGTTGGAATTGGGTGTGGCTTTTTATCTGTGGAATTTACACAAGACAGGCGAAGATGTTAGGCGATTGTGGACAGAAGACGATGAGAAGAAGTTCAAGGATGTGGTGAAATCAAACCCTCCTTCACTTGAAAAATGTTTTTGGGATCAAATTTTCAAATCATTTCCTACAAAGAGCAGGGAAGATTTAGTAAGTTACTACTTCAATGTCTTTATTTTGCAGCGCAGAGGATACCAAAATAGGAATACTCCGGATGACATTGACAGTGATGATGATGAATCAGAATATGGTCCATTGAAGAATGCTTTTGGACATCAAACACACAAATCGCGCAACATCACCTTATTGTCTCCCAAAAAGCCCAAGAAAACGGAACATAGCAAGTGA 1749 0.4134 MMCSGEPLDLYKLFMVVKEKGGYDAVCKNMLWDLVAEEYGLGLNVGSSIELVYSKHLSTLETWLKNVADSKFPECGLMDDRVSFGKKLMEVQADFLLDVYSEEGAGDKIKTACDFVDGRKLCGTNRVRGLNPELSGAKKIVDLNALDHKMNGPSIGSFCSNNFSNNSSDIQNHLNEIKTSTVDISDEANIMPTLSEEGDSCDKNDGHDDDDDVMVLDPSDSCDKNDGHDDDDDDVMVLDPSTVNKESFGRKRKRESMSEMLSWLTGIAKNPCDPAVGSMPEKSKWKSYGSEEIWKQVLLFRQATFFSSDHVSWQKMHPCMYDDQVGANYNLRERLKSDKNLTCGVSSNMRGIQGGSERNPSPHSEVEKLLLDQCSMVPIPVGPSHQAEVPEWTGVAIESDSKWLGSQIWPSAEIKSKVIERDPIGTGRKDSCGCEVQGSVECVRFHIAQKRAKVKLELGVAFYLWNLHKTGEDVRRLWTEDDEKKFKDVVKSNPPSLEKCFWDQIFKSFPTKSREDLVSYYFNVFILQRRGYQNRNTPDDIDSDDDESEYGPLKNAFGHQTHKSRNITLLSPKKPKKTEHSK* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2481 582 Gene3D - 1 73 IPR036431 GO:0003677
Ahy14g2481 582 SMART bright_3 2 66 IPR001606 GO:0003677
Ahy14g2481 582 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 578 - -
Ahy14g2481 582 SMART sant 474 527 IPR001005 -
Ahy14g2481 582 Pfam Myb-like DNA-binding domain 477 524 IPR001005 -
Ahy14g2481 582 SMART ELM2_2 379 429 IPR000949 -
Ahy14g2481 582 MobiDBLite consensus disorder prediction 193 235 - -
Ahy14g2481 582 SUPERFAMILY ARID-like 3 73 IPR036431 GO:0003677
Ahy14g2481 582 CDD ARID 4 61 - -
Ahy14g2481 582 Pfam ARID/BRIGHT DNA binding domain 4 60 IPR001606 GO:0003677
Ahy14g2481 582 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 1 578 - -
Ahy14g2481 582 MobiDBLite consensus disorder prediction 536 582 - -
Ahy14g2481 582 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Ahy14g2481 582 CDD SANT 478 525 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2481 Ahy-Chr14 130088182 130093238 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Ahy14g2481 ARID 8.90E-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2481 - - adu:107485899 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2481 14 130088182 130093238 Ahy4g2193 4 117340210 117345281 hybridization