Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2389 ATGTACAGCACCACTCTCATCCCTGCTTCTAGTTCTGGTCTTGCTTTCGCCTCACCGATTCAGAGAACCCACCGAAAGCAGCACCACCATGTTCGTTGGCATTGCTCGTCGCTTTCTGCTGCAAGCGGCACCGCTACTCAAGTCTCAACCGTTCCATGGGGCTGCGATAGTGATTCCTTGGAGAACGCATCGGCGTTGCAGAAGTGGCTGTCAGAGTCAGGGCTTCCACCGCAGAAGATGAGCATACAGAGAGTTGAGGTCGGAGAGAGGGGCCTAGTTGCCTCAAAGAATATAAGGAAAGGAGAGAAGCTCCTCTTCGTCCCTCCCACGCTCGTTATCACCGAAGATTCCGAGTGGACCTGCCCCGAAGCTGGTGCAATTTTGAAAAAGAATTCGGTGCCGGATTGGCCATTGCTTGCAACTTATCTCATAAGTGAAGCCAGCTTCATGAAATCTTCAAGATGGAGTAACTATATATCAGCCCTACCTCGCCAGCCTTATTCACTTCTTTACTGGTCACAAGCAGAACTAGATCGCTATTTGGAAGCTTCACAAATTAGGGAGAGAGCAGTTGACAGGATTAATAATGTCATTGGAACATACAATGATTTGAGGCTCAGAATATTTTCCAAACACCCCGATTTGTTCCCTGAAGAGTTGTTCAACATTGAGTCCTTCAAATGGTCATTTGGCATTCTCTTTTCTCGTTTGGTTCGGTTACCCTCAATGGACGGAAGGGTTGCCTTGGTTCCTTGGGCAGATATGTTGAATCATAGTTGTGAAGTGGATACCTTTTTGGATTATGATAATTTATCAAAGGGAATTGTCTTTACTACAGATCGGCCGTATCAACCAGGTGAGCAGGTGTTCATTTCATATGGAAAAAAATCAAATGGGGAGCTTCTATTATCGTATGGGTTTGTTCCAAGGGAAGGCGCCAATCCTTGTGATTCAGTTGAGTTGTCAGTGTCACTCAAGAAATCTGATAAATCCTACAAGGAGAAATTAGAACTCTTGAAGAAGTATGGATTATCAGGATCTCAATGTTTTCCAATACAGATTACTGGTTGGCCATTGGAGTTAATGGCTTATGCTTATTTAGCTGTTAGTCCTTCAAGCATGAGAGCGCAATTTGAAGAGATGGCTGCGGCAGCATCGAATAAAACTACCATCAAGAAAGATTCAAGATATCCTGAAATAGAGGAGCAAGCATTGCAGTTCATACTTGACAGTTGTGAATCCAGTATATCGAAATACAACAATTTCTTACAGGCAAGTGGATCTCTGGATTTAGATGTAACTTCTCCGAAACAACTCAACCGTAGACTTTTTCTGAAACAGCTCGCGGTGGACTTGTGTACAAGTGAGCGAAGGATATTATTTCGTACTCAATATATACTGAGAAGAAGACTGAGGGATATGAGGGCTGGTGAATTAAGAGCTTTAAAAATCTTTGATGGGCTCCGAAATCTTTTCCAATGA 1482 0.4366 MYSTTLIPASSSGLAFASPIQRTHRKQHHHVRWHCSSLSAASGTATQVSTVPWGCDSDSLENASALQKWLSESGLPPQKMSIQRVEVGERGLVASKNIRKGEKLLFVPPTLVITEDSEWTCPEAGAILKKNSVPDWPLLATYLISEASFMKSSRWSNYISALPRQPYSLLYWSQAELDRYLEASQIRERAVDRINNVIGTYNDLRLRIFSKHPDLFPEELFNIESFKWSFGILFSRLVRLPSMDGRVALVPWADMLNHSCEVDTFLDYDNLSKGIVFTTDRPYQPGEQVFISYGKKSNGELLLSYGFVPREGANPCDSVELSVSLKKSDKSYKEKLELLKKYGLSGSQCFPIQITGWPLELMAYAYLAVSPSSMRAQFEEMAAAASNKTTIKKDSRYPEIEEQALQFILDSCESSISKYNNFLQASGSLDLDVTSPKQLNRRLFLKQLAVDLCTSERRILFRTQYILRRRLRDMRAGELRALKIFDGLRNLFQ* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2389 493 Gene3D - 313 482 IPR036464 -
Ahy14g2389 493 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 23 288 - -
Ahy14g2389 493 SUPERFAMILY SET domain 62 310 IPR046341 -
Ahy14g2389 493 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 324 489 IPR036464 -
Ahy14g2389 493 SMART set_7 78 300 IPR001214 GO:0005515
Ahy14g2389 493 Pfam SET domain 90 294 IPR001214 GO:0005515
Ahy14g2389 493 Gene3D set domain protein methyltransferase, domain 1 15 307 - -
Ahy14g2389 493 PANTHER - 23 288 - -
Ahy14g2389 493 CDD SET_RBCMT 77 308 IPR044431 GO:0016279|GO:0018022
Ahy14g2389 493 PIRSF RMT_SET 3 490 IPR011192 GO:0009507|GO:0030785
Ahy14g2389 493 Pfam Rubisco LSMT substrate-binding 327 460 IPR015353 -
Ahy14g2389 493 ProSiteProfiles SET domain profile. 78 294 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2389 Ahy-Chr14 126683222 126687947 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy14g2389 SET 3.10E-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2389 - - gmx:100803319 796.578