Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2357 ATGATGGGTTCAGGTACCAATTTGGTTACCACGGTCATTGGGTTTGGGATGAGTGCCACTTTCATTGTGTTTGTGTGCACAAGAATCATTTGTGGGAGGATAAGAGGGAGTGTTGAATCTCGCATGATGTATGAGATTGAATCCAGGATTGACGTAGAACAGCCAGAACATCATGCTAATGACCCTGAACCCGAGCCTGTTATGCTTGATGCAATCCCCACTTTGAAGTTCAACCAAGAGGCCTTCAGTGCCATTGAAGATACACAGTGTGTCATATGTTTGGCAGATTACAGAGAAAGAGAAGTGTTACGCATCATGCCGAAATGCGGTCACACATTTCATCTTTCTTGCATTGACATATGGCTGAGGAAACAATCCACTTGCCCGGTATGCCGTCTGCCATTGAAAAACTCGTCCGAGGCGAAACATGTTAGACCTGTTACATTTACCATGAGCCAGCCTCTTGATGAGTCGCACACACCAGAAAGGAATCAAGATAGTGAGAGTCGTGTCGAACCGGCCGCTAGCAACTCCTCACAACCACCACCTCCCGGAGAACCAGAAGCAAGGCAATGA 576 0.4688 MMGSGTNLVTTVIGFGMSATFIVFVCTRIICGRIRGSVESRMMYEIESRIDVEQPEHHANDPEPEPVMLDAIPTLKFNQEAFSAIEDTQCVICLADYREREVLRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPLKNSSEAKHVRPVTFTMSQPLDESHTPERNQDSESRVEPAASNSSQPPPPGEPEARQ* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2357 191 MobiDBLite consensus disorder prediction 177 191 - -
Ahy14g2357 191 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Ahy14g2357 191 PANTHER OS11G0150450 PROTEIN 1 167 - -
Ahy14g2357 191 Pfam Ring finger domain 89 132 IPR001841 -
Ahy14g2357 191 SUPERFAMILY RING/U-box 79 138 - -
Ahy14g2357 191 SMART ring_2 90 131 IPR001841 -
Ahy14g2357 191 MobiDBLite consensus disorder prediction 144 191 - -
Ahy14g2357 191 MobiDBLite consensus disorder prediction 144 158 - -
Ahy14g2357 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 142 IPR013083 -
Ahy14g2357 191 CDD RING-H2_EL5_like 89 132 - -
Ahy14g2357 191 PANTHER OS02G0676500 PROTEIN 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2357 Ahy-Chr14 126071447 126073625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2357 79 135 C3H Transcription Factor Family AT4G10160 56.140 9.90e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2357 - - ccaj:109802319 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2357 14 126071447 126073625 Ahy14g2357 14 126071447 126073625 ECH
Ahy14g2357 14 126071447 126073625 Ahy4g2076 4 114501856 114504059 hybridization
Ahy14g2357 14 126071447 126073625 Ahy12g2521 12 114162026 114163877 PCT
Ahy14g2357 14 126071447 126073625 Ahy2g2184 2 97594969 97596978 PCT
Ahy12g2521 12 114162026 114163877 Ahy14g2357 14 126071447 126073625 PCT
Ahy2g2184 2 97594969 97596978 Ahy14g2357 14 126071447 126073625 PCT