Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2338 ATGAATAATATGATGAGAAAGTTGAAAAGCATTGCTGCTGGCAAGACTTCTCTTCTTCCAGATTCTGATATAGAAGCAACAATAGTGAATGGTAATGGAACAGAAACAGGTCAAATAATCACTACTGCTATTACTGGTCGCGATGGACTATCAAAACAGACAATCTCATACATGGCAGAACGTGTGGTTGGTACCGGTTCTTTTGGTGTTGTTTATCAGGCTAAGTGTGTTGAAACGGGTGAATTAGTTGCAATAAAGAAAGTGTTGCAAGACAAGAGATACAAGAACAGGGAACTGCAAGTGATGAGAATTCTTGACCATACAAATGTTCTTAAACTAAAGCATTGCTTCTATTCAATGGCAAATAAAGATGAATTGTACCTTAATCTTGTTTTGGAGTATGTTCCTGAAACTGTCTATAGAGTCTCAAAGCAATATGTCAGGGTGCACCAACATATGCCTACAATTTATATTCAACTATATGCATACCAAATATGCCGTGGTTTAAATTATTTGCATCATGTGATCAATGTGTGTCACCGTGACATCAAGCCCCAAAATCTCTTGGTTAACCCCCAAACTCATCAGTTAAAGATATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGTGAACCAAACATATCATACATATGCTCAAGGTATTATAGAGCTCCAGAACTAATTTTTGGGGCAACAGAATACACAACTGCCATAGATGTTTGGTCAGCTGGTTGTGTTTTAGCTGAGCTTATGTTAGGACAGCCAATGTTTCCTGGAGAGAGTGGGGTGGATCAATTAGTAGAGATTATTAAGATTTTGGGAACACCAACCAAAGAAGAAATAAAGTGCATGAATCCAAATTACAACGAGTTTAAGTTTCCGCAAATAAAAGCTCATCCATGGCATAAGGTTTTTCCCAAGGCAATGCCTCCTCAAGCAATAGATCTAGTCTCAAGGATGCTTCAATATTCACCTAATCTACGTTGCACTGCTTTGGAAGCGTGTGCTCACCCATTCTTTGATGATCTCCGAAACCCTAACATAACCTTGCCAAATGGGCGACCACTACCACCTTTGTTTGATTTCACAGCTCAAGAACTAGCGGATGCACCCGATGAGTTGCGTCGACGTCTAATTCCAGAGCATGCAAGAAATTAA 1161 0.3953 MNNMMRKLKSIAAGKTSLLPDSDIEATIVNGNGTETGQIITTAITGRDGLSKQTISYMAERVVGTGSFGVVYQAKCVETGELVAIKKVLQDKRYKNRELQVMRILDHTNVLKLKHCFYSMANKDELYLNLVLEYVPETVYRVSKQYVRVHQHMPTIYIQLYAYQICRGLNYLHHVINVCHRDIKPQNLLVNPQTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELMLGQPMFPGESGVDQLVEIIKILGTPTKEEIKCMNPNYNEFKFPQIKAHPWHKVFPKAMPPQAIDLVSRMLQYSPNLRCTALEACAHPFFDDLRNPNITLPNGRPLPPLFDFTAQELADAPDELRRRLIPEHARN* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2338 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Ahy14g2338 386 CDD STKc_GSK3 52 344 IPR039192 -
Ahy14g2338 386 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 20 385 - -
Ahy14g2338 386 Pfam Protein kinase domain 57 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy14g2338 386 SUPERFAMILY Protein kinase-like (PK-like) 56 369 IPR011009 -
Ahy14g2338 386 Gene3D Phosphorylase Kinase; domain 1 42 136 - -
Ahy14g2338 386 ProSitePatterns Protein kinases ATP-binding region signature. 63 87 IPR017441 GO:0005524
Ahy14g2338 386 SMART serkin_6 57 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy14g2338 386 ProSiteProfiles Protein kinase domain profile. 57 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy14g2338 386 Gene3D Transferase(Phosphotransferase) domain 1 137 385 - -
Ahy14g2338 386 PANTHER SHAGGY-LIKE KINASE 20 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2338 Ahy-Chr14 125416026 125421072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2338 63 344 Core Cell Cycle Gene Families AT1G76540 35.862 1.19e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Ahy14g2338 Pkinase 4.50E-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2338 K00924 - gmx:100784150 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2338 14 125416026 125421072 Ahy14g2338 14 125416026 125421072 ECH
Ahy14g2338 14 125416026 125421072 Ahy4g2057 4 114002098 114007086 hybridization