Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2327 ATGCCTCGCGGAACGCTTGAAGTCATTCTTGTCAGCGCAAAAGGTCTTAAGGACGCTGATTTTCTCAAAAAAATGGATCCTTATGTAATTCTCACTTATCGAGCACAGGAGAATAGAAGCAGTGTGGCAAGAGGTGGAGGATCTAACCCTCGTTGGAATGAGAGCTTTCTTTTCACAGTTTCTGATAATGTTGCTGAACTTAATCTGAGGATTATGGACAAAGATACTTTTACTCGGGATGATTTTCTTGGTGAGGCAAGTGGTAACTTGGGTGATGAACTCCAAGAGGAAAGCTATAAACATGGGAGGATGAGGATGGAATGA 324 0.4228 MPRGTLEVILVSAKGLKDADFLKKMDPYVILTYRAQENRSSVARGGGSNPRWNESFLFTVSDNVAELNLRIMDKDTFTRDDFLGEASGNLGDELQEESYKHGRMRME* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2327 107 MobiDBLite consensus disorder prediction 86 107 - -
Ahy14g2327 107 Pfam C2 domain 4 99 IPR000008 -
Ahy14g2327 107 PANTHER ELICITOR-RESPONSIVE-LIKE PROTEIN 1 95 - -
Ahy14g2327 107 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 99 IPR035892 -
Ahy14g2327 107 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Ahy14g2327 107 Gene3D C2 domain 2 107 IPR035892 -
Ahy14g2327 107 SMART C2_3c 5 102 IPR000008 -
Ahy14g2327 107 PANTHER C2 DOMAIN-CONTAINING 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2327 Ahy-Chr14 125262063 125264258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2327 4 86 C2H2 Transcription Factor Family AT4G21160 36.145 6.77e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2327 - - ahf:112794411 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2327 14 125262063 125264258 Ahy4g2046 4 113848689 113850687 hybridization