LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy14g2271	ATGGCGTCTGCTTTAGGTGAAGGTGAAGCCTCTTCTTCTACCGCTACCGGAAACTCTTGTAAGCATCAGGTGTTCTTGAGTTTTAGGGGAGAAGACACCCGGAAAGGCTTCACTGATCATCTATCTGCCTCACTAGAAAGACGAGGAATCACAGCTTACAGAGACGACAAGAACCTTGAGAAAGGTGATGTTATTCAAGATGAACTTTTGAAAGCAATAGAAGAATCTATGTTTGCTGTCGTTGTTCTGTCGCCAAACTATGCTTCCTCCAGTTGGTGCTTGGACGAGCTACACAATATCCTTGAGTGCAGCAAGAATCATGGGCTATCTGTTGTGCCAGTCTTCTACAATGTGGAGCCTTCTGATGTTAGGCATCAAAAAGGAAACTTCAAGAAAGCTCTTAGAAAGCATCAGAATAGATTTGGTCAAGACAGTGATAAGATTAGAAGATGGACAGATGCTTTGACCCAAATTGCTAGCTTTTCTGGTTGGGACTCCAAGAACCAGCAGGAGGCAAGACTAGTGGAGAACATAGTTGACCACATACAAAAGAAGCTACTTCCAAAATTTCCATCTTGCCCAGAAAATCTTGTTGGGATTCTTCCAAAGATGGAGGATGTGTTCTCACTTCTAGGTATGGGGTCAAATAATGTTCACTTTGTAGGCATATGGGGCATGGGTGGCATAGGTAAAACTACCGTTGCTAGAGCAGTCTATGAAGCCATCCAATCTAAGTTTCAAGTTTGTTGCTTTATGAGGGATGTTAGGGAGGTTTCCAAGGCAAAAGGTTTTGTTCACTTACAAAAACTTCTTCTCTCAACACTAAATGTTAGTGATGAATTTTATGACATTGAAGATGGAAAGAAGATGATACGAAACTGGTTATGCAAGAAAAAGGTTCTTCTTGTTCTTGATGATATAAGTGAGGAAATCCAGTTGGAAAATTTGGCTGGGAAGCAAGATTGGTTTGGTCCTGGAAGCACAGTAATAATCACAACTAGGTACATGCATTTGCTTGAGATACATAGAGTGAATGGAACATATAAGGTTGAAGGGTTGGTGGAAGAAGAAGCCCTCCGCCTCTTTTGTTTGAAAGCCTTTAAAAGAGATAAACCAGAAGAAGGCTATTTGGATTTGTCCAAAGACATTGCCAAATATACTGGTGGCCTTCCATTGGCACTTAAGGTATTAGGTTCCTATTTGTGTGGCAGAGATCTTCATTTTTGGCATAGAACTGCTAGAGAATTGGGGAGCGTTCTACCCTCGGAAATCCTCAATACATTGAAAATAAGCTTTGACCATTTAGAGCCAACAGAGAAATATATCTTTCTGGATATTGCTTGTTTCTTCAAAGGAATGAACAGAGACGAAGTAGTAAATATATTACAGATGTGTGATTATTATGATGGAATTGAAAATGGGATTGTTACTTTGATTGAAAAATCTTTGATAACTCTAAGTAAGGATGAGATGTTGGAAATGCATGATCTGCTTCAAGATATGGGAAAAAATATTGTATTTCAAGAATTTCCAACTAATCCCGGGAAACGAAGCAGGTTGTGGTCTAAAATGGACATTGATCAAGTTTTGACAAATGATATGGGAACTGAAGCAATTCAAGGAATTGTTCTACACTCAAGTTATGAAGCTCGGTGGAGTATTGAAGCCTTTTCAAAGACAAGTCAACTGACATTTCTCAGTTTACATGGCATGAAACTTCCACTTGGTCTCAACTACCTTCCTAGATCATTAAAAGTCCTTCATTGGAATTACTGTCCCTTGAAGACTTTACCCCTGGCGGATCAAAAGTATGAACTGGTTGAAATTAAACTGCGGAATAGCAAGATTGAGCAAGTTTGGCACGGGAAAAAGTTTCTTGAAAAGTTGAAGTACCTGGATTTGAGTGTGTCTGAGAACCTAACTGGAACCCCTGATATTTCTGGTGCACCAATGCTTCAAAAGCTTAATCTGCAATTCTGCTCAGGGCTGAGTGAGGTTCACCCATCCCTTACACACCATGAGAACCTTGTTCAATTGGATTTCAGCAATTGCACAAGTCTCAAAACTATTCCAGGCAAACTGAAGATGAGTTCACTGGAGGAATTAGACCTGAGCAATTGCAGCAGTTTTGTAAACTTGCCAGAATTCGCGGAATGCATGAAACTATCATTGCTTTCATTGAAACGAACCTCCATAAAAAACCTGCCACGTTCTGTCTCATCAAGTCTACCTTTGCTATGCAGTCTAGACTTAAGTTGCTGCAATCTAACTAAACTGGCATTCCCTTGCAACATTTTCCACTTGCCATTGTTGACTGATTTGAATCTGTCTCGTAACAAATTTGTCCATGTACCAATAAGCCTTCATAAACTTCCCAAGCTCAAACGTCTTTGTCTAAATAATTGCCCAAATCTTAAGTCTCTCCCGGTGCTCCCCTCAAGTATTGAGAAATTGGAAGCATGCAATTCTTTCATTGCTTATCATGAATCAGGATTATTTGATCGTTGTGAATCCATATTCAATTTCTTTCGATCATCGAGCAGTGATCGTTCTCAGGTCTTTATCATGGAGTTCACATCATGGGTATATACGAAAGAAAAAGTTTCACCGTGGCAATCTTTTTTAAGTTTCAATCTAGAAGATGGTGAACATCTTTCTCTCCCACCACAAGGTGATTTCGCTCCAAATGATAGGTTGGGAATTATACTATGCTTTCAGACAGCTACTTATTTGAACAAGACGGATTTGTGTGTCTGCAATGGTAGAAGATGGATCACCAAGAAGAATTCAGGTGAAAAGGGCAATCGCGTGTATTTTATCCTTCTAACCAATGACTATTTTAGTGATGAATCATGCCCTGATTATACGTTTAAGCTCTCTGTCAACAATGACCTTAATCACAACATGCACAAACAAGCATGGAGCTATGGCTCCAACCAATGCTGGGGCCGCTGGGTGCATCAACAAGATTTTATTGACTAA	2982	0.3987	MASALGEGEASSSTATGNSCKHQVFLSFRGEDTRKGFTDHLSASLERRGITAYRDDKNLEKGDVIQDELLKAIEESMFAVVVLSPNYASSSWCLDELHNILECSKNHGLSVVPVFYNVEPSDVRHQKGNFKKALRKHQNRFGQDSDKIRRWTDALTQIASFSGWDSKNQQEARLVENIVDHIQKKLLPKFPSCPENLVGILPKMEDVFSLLGMGSNNVHFVGIWGMGGIGKTTVARAVYEAIQSKFQVCCFMRDVREVSKAKGFVHLQKLLLSTLNVSDEFYDIEDGKKMIRNWLCKKKVLLVLDDISEEIQLENLAGKQDWFGPGSTVIITTRYMHLLEIHRVNGTYKVEGLVEEEALRLFCLKAFKRDKPEEGYLDLSKDIAKYTGGLPLALKVLGSYLCGRDLHFWHRTARELGSVLPSEILNTLKISFDHLEPTEKYIFLDIACFFKGMNRDEVVNILQMCDYYDGIENGIVTLIEKSLITLSKDEMLEMHDLLQDMGKNIVFQEFPTNPGKRSRLWSKMDIDQVLTNDMGTEAIQGIVLHSSYEARWSIEAFSKTSQLTFLSLHGMKLPLGLNYLPRSLKVLHWNYCPLKTLPLADQKYELVEIKLRNSKIEQVWHGKKFLEKLKYLDLSVSENLTGTPDISGAPMLQKLNLQFCSGLSEVHPSLTHHENLVQLDFSNCTSLKTIPGKLKMSSLEELDLSNCSSFVNLPEFAECMKLSLLSLKRTSIKNLPRSVSSSLPLLCSLDLSCCNLTKLAFPCNIFHLPLLTDLNLSRNKFVHVPISLHKLPKLKRLCLNNCPNLKSLPVLPSSIEKLEACNSFIAYHESGLFDRCESIFNFFRSSSSDRSQVFIMEFTSWVYTKEKVSPWQSFLSFNLEDGEHLSLPPQGDFAPNDRLGIILCFQTATYLNKTDLCVCNGRRWITKKNSGEKGNRVYFILLTNDYFSDESCPDYTFKLSVNNDLNHNMHKQAWSYGSNQCWGRWVHQQDFID*	994

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy14g2271	993	Pfam	TIR domain	21	196	IPR000157	GO:0007165
	Ahy14g2271	993	SUPERFAMILY	L domain-like	510	826	-	-
	Ahy14g2271	993	Gene3D	Ribonuclease Inhibitor	550	695	IPR032675	-
	Ahy14g2271	993	Gene3D	Ribonuclease Inhibitor	696	829	IPR032675	-
	Ahy14g2271	993	Pfam	NB-ARC domain	207	417	IPR002182	GO:0043531
	Ahy14g2271	993	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	185	446	IPR027417	-
	Ahy14g2271	993	Gene3D	-	15	183	IPR035897	-
	Ahy14g2271	993	Gene3D	-	352	436	IPR042197	-
	Ahy14g2271	993	SUPERFAMILY	"Winged helix" DNA-binding domain	422	530	IPR036390	-
	Ahy14g2271	993	ProSiteProfiles	TIR domain profile.	20	186	IPR000157	GO:0007165
	Ahy14g2271	993	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	15	755	IPR044974	GO:0006952
	Ahy14g2271	993	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	15	755	-	-
	Ahy14g2271	993	SUPERFAMILY	Toll/Interleukin receptor TIR domain	12	164	IPR035897	-
	Ahy14g2271	993	PRINTS	Disease resistance protein signature	220	235	-	-
	Ahy14g2271	993	PRINTS	Disease resistance protein signature	294	308	-	-
	Ahy14g2271	993	PRINTS	Disease resistance protein signature	387	401	-	-
	Ahy14g2271	993	PRINTS	Disease resistance protein signature	694	710	-	-
	Ahy14g2271	993	SMART	till_3	21	161	IPR000157	GO:0007165
	Ahy14g2271	993	Gene3D	-	184	345	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy14g2271	Ahy-Chr14	123978312	123983145	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy14g2271	29	825	WRKY Transcription Factor Family	AT4G12020	31.547	5.00e-100	344

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy14g2271	-		-	adu:107485461	1876.68