Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2261 ATGAGCTTCCTTCAGGGGATCATCGATTCCTTTAACTCCGTCTTCTCTTCTGATCCTTCTTCTTCTTCTTCCTCTTCTCAATCTCACCTTAATTCGACGTCAATGGAAGCTGCTTCTTCTCCTTCTTCGGTTTCGAACGAGCGCGTGGCTTTCAAGCTCAAAGGTTACTACGATTTGGCGACGCAGGAGATCGCAAAGGCCGTTCGGGCCGAAGAGTGGGGTTTGGTCGACGACGCTATTCTTCACTACAAGAACGCTCAGAGGATCCTCCTTGAAGCCCATTCTACCCCTGTCCCTTCCTTCATCACTTCCAGTGAACAAGCAAAGGTGCAATCTTATCGTCAGAAGATATCGAAATGGCAGGGCCAAGTCTCTGAGAGATTACAGGCTCTAAGTAGACGAGCAGGGAGCTCATCTGCCAATCAGAGCACCTCAAACATTGCACAAACTGCTGCAGTTCCACTTAAGCCATCAAATGGTAGAAAAAATGTGGTACACAGGTATTCTCAACCAAGAGGGCAGGTGAATAAAGTTGGAAGCTCAAATTCTAGTCAAGCTGGTGTAAATTATGATACAAAATTGGTTGAAATGATTAACACTGCAATAGTAGACAGAAGTCCTTCTGTTAGATGGGATGATGTCGCTGGGCTTGAGAAGGCAAAGCAAGCTTTAATGGAGATGGTTATTTTGCCAACTAAGAGGAGAGACTTATTCACTGGTCTTCGAAGGCCAGCCAGAGGTTTGCTACTCTTCGGTCCACCTGGTAATGGAAAGACCATGCTTGCCAAAGCTGTAGCTTCAGAATCAGATGCAACATTTTTCAATGTGTCTTCCGCATCATTGACATCTAAATGGGTGGGTGAGGCTGAAAAGCTTGTCCGGACACTATTCTCAGTTGCTGTATCCAGACAGCCATCTGTGATTTTCATTGATGAGATTGATAGTATAATGTCAACAAGAACGGAAAATGAGAATGATGCGAGCAGACGGTTAAAATCTGAATTTCTTATCCAGTTTGATGGGGTGACCTCCAATAGTAATGATATTGTGATTGTAATTGGTGCAACCAACAAGCCACAGGAATTGGATGATGCAGTTCTTAGGAGGCTGGTAAAGAGAATCTATGTGCCTTTACCTGATGAAAATGTTCGGAGACTTCTGCTAAAACACAAACTCAAGGGTCAAGCATTCTCATTACCGAACAGAGATCTGGAAAAACTTGTCAAAGAGACAGAAGGTTATTCTGGAAGTGATCTTCAAGCATTGTGTGAAGAGGCTGCAATGATGCCAATTAGAGAGCTGGGATCTAACATTCTTACTGTTAATGCAAATCAGGTAAGAGGATTAACTTACAATGATTTCAAGATGGCAATGACGGTCATCAGACCAAGCTTAAAGAAAAGCAAGTGGGAAGAGTTGGAACGCTGGAATGAGGAGTTTGGCTCTAATTGA 1452 0.436 MSFLQGIIDSFNSVFSSDPSSSSSSSQSHLNSTSMEAASSPSSVSNERVAFKLKGYYDLATQEIAKAVRAEEWGLVDDAILHYKNAQRILLEAHSTPVPSFITSSEQAKVQSYRQKISKWQGQVSERLQALSRRAGSSSANQSTSNIAQTAAVPLKPSNGRKNVVHRYSQPRGQVNKVGSSNSSQAGVNYDTKLVEMINTAIVDRSPSVRWDDVAGLEKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESDATFFNVSSASLTSKWVGEAEKLVRTLFSVAVSRQPSVIFIDEIDSIMSTRTENENDASRRLKSEFLIQFDGVTSNSNDIVIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPNRDLEKLVKETEGYSGSDLQALCEEAAMMPIRELGSNILTVNANQVRGLTYNDFKMAMTVIRPSLKKSKWEELERWNEEFGSN* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2261 483 ProSitePatterns AAA-protein family signature. 350 369 IPR003960 GO:0005524|GO:0016887
Ahy14g2261 483 Pfam AAA+ lid domain 403 434 IPR041569 -
Ahy14g2261 483 CDD MIT_spastin 53 131 - -
Ahy14g2261 483 PANTHER AAA DOMAIN-CONTAINING 4 483 - -
Ahy14g2261 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 480 IPR027417 -
Ahy14g2261 483 MobiDBLite consensus disorder prediction 15 41 - -
Ahy14g2261 483 PANTHER BNAC04G50250D PROTEIN 4 483 - -
Ahy14g2261 483 SMART AAA_5 244 380 IPR003593 -
Ahy14g2261 483 Pfam ATPase family associated with various cellular activities (AAA) 248 378 IPR003959 GO:0005524|GO:0016887
Ahy14g2261 483 Gene3D - 46 135 - -
Ahy14g2261 483 SMART smart 53 130 IPR007330 -
Ahy14g2261 483 Gene3D - 207 477 IPR027417 -
Ahy14g2261 483 Gene3D - 379 461 - -
Ahy14g2261 483 MobiDBLite consensus disorder prediction 132 152 - -
Ahy14g2261 483 CDD AAA 233 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2261 Ahy-Chr14 123800211 123805131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2261 189 433 Calmodulin-binding Proteins AT3G56690 41.434 1.53e-48 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2261 K13254 - gmx:100780946 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2261 14 123800211 123805131 Ahy14g2261 14 123800211 123805131 ECH
Ahy14g2261 14 123800211 123805131 Ahy4g1990 4 112542625 112547589 hybridization