Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2231 ATGAGTGCAAGCACAAGCCGCCGCGGCGGCGGCGGTAGCAGCGGCGCTAGTGGGAGTGGTACCAAGGGTAGGGGTAGTGGCGGTCCTTGCGGCGCTTGCAAGTTTCTGAGGAGGAAATGTGCTCCGGGATGCGTCTTTGCGCCCTACTTTGATCCTGATCAAGGTGCAACCTACTTTGCATCGGTGCACAAGGTTTTTGGGGCTAGCAACGTTGGTAAGCTTCTTTCCAAAATTCCAGCTCATAAGAGGCTTGATGCAGTTATTACTATTTGTTATGAAGCACAAGCACGAATGAAAGATCCTGTTTATGGATGTGTTGGTCAAATCTGTACCCTTCAACAACAGGTGTTAGCTTTACAAGCCGAACTCTCATTCTTACAAAATCATCTTACTACAATGGAGATACGCCAACCGCTACCAATTCCTCCAACGCAAGGAGTGCCGACATCAACTGTTTTCTCAGTTGCGGACTTACCAACGGTTGTGGGTGTTGCCCCCGCCACCTTATCAATGCCGGCCACCTTTGATCTGTCTTCCCACTTTGATCCAGCAACGGCCCAAGCATCTTGGGCTGTGTATCAACGGGCCATGATGGACCCACGCCAATACATGGCTGTTGCCAGCCCAATAGGCCCAACTGCTGGTGGTGGTGTTGATCTCCAAACAGTTGCACGTGAGCTCATCAATAGGCATGTGCCTCCGCAAGCACCACCTCAGGCTTTTGGTTCCAATGCTGCATCGACGTCAGCTCCATCGCTTAGTTCTTCTAAGTGA 774 0.5129 MSASTSRRGGGGSSGASGSGTKGRGSGGPCGACKFLRRKCAPGCVFAPYFDPDQGATYFASVHKVFGASNVGKLLSKIPAHKRLDAVITICYEAQARMKDPVYGCVGQICTLQQQVLALQAELSFLQNHLTTMEIRQPLPIPPTQGVPTSTVFSVADLPTVVGVAPATLSMPATFDLSSHFDPATAQASWAVYQRAMMDPRQYMAVASPIGPTAGGGVDLQTVARELINRHVPPQAPPQAFGSNAASTSAPSLSSSK* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2231 257 ProSiteProfiles LOB domain profile. 28 130 IPR004883 -
Ahy14g2231 257 MobiDBLite consensus disorder prediction 232 257 - -
Ahy14g2231 257 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 232 - -
Ahy14g2231 257 MobiDBLite consensus disorder prediction 1 26 - -
Ahy14g2231 257 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 1 232 - -
Ahy14g2231 257 MobiDBLite consensus disorder prediction 1 21 - -
Ahy14g2231 257 MobiDBLite consensus disorder prediction 240 257 - -
Ahy14g2231 257 Pfam Lateral organ boundaries (LOB) domain 29 127 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2231 Ahy-Chr14 122288927 122306964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2231 32 257 AS2 family AT2G45420 50.000 8.40e-68 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy14g2231 LOB 7.20E-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2231 K21994 - twl:119982189 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2231 14 122288927 122306964 Ahy14g2231 14 122288927 122306964 ECH
Ahy14g2231 14 122288927 122306964 Ahy4g1968 4 111959420 111977654 hybridization
Ahy14g2231 14 122288927 122306964 Ahy12g2388 12 112013414 112019192 PCT
Ahy14g2231 14 122288927 122306964 Ahy2g2063 2 95883585 95889736 PCT
Ahy12g2388 12 112013414 112019192 Ahy14g2231 14 122288927 122306964 PCT
Ahy2g2063 2 95883585 95889736 Ahy14g2231 14 122288927 122306964 PCT