Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2202 ATGTCTGCGAATTCTGAGAATGTTGGGGTTTGTTCTCTTTGCCAGAAGGCATTATCTCCTGATAATGAGATGACAAGTGATCCTGCGACAGTTGGTGTATGCGGTGATTGTAAATTTTTATTGCTTGAGGACTATGGGAATCATATGGTTACCCCTCAGAGCTTGCAAAGAAGGTTCAGAGGCCGGTTCAGGCGCAACAGCTCTGAGTCTGTTGACAACATGGTTAATAATTTGAGGCAAAGCAGATCTGCGACTGCTTCTTTGGAGGACGTTCAACAAATTGTGGAGGGGGATGCCGCTGCTTGGGCGACGCAGCATGCTAGTTTACATAATACCCCTAGTGGTTCTAGGAGATGGAGGCGGGTTCTCTCTGATACCGACAGTGATGGTTTCGATAATTGGAGCTCACTTTACGGTGAAAATGAATCAAATGAGAGCTTTAGACGGTATAGGATTCCTCATGGTGAGACTGATTCCCTCTCTTTCAGTGCTTATGGAGGTGACTCAGATGTCTCCGTGGATAGACATAGTATTATACATAGAGGAATGTTTGGTTTACCAGATGTGGGAGATGAGTTTGATAGTGACACCGATATAGATCCAATGCATGCCGGTGTCAGTCACTGGCACTCAGATGATATGGAAGATGATGAGGAAGAGGAGGAGGACAATGAGGACGATGATGAGGAGGAGGAAGAGGATGTCCAAGGGGAATGGGAAATAGCTGATGCTGTAGAAGCGGAAGCCACAGCTCGCCTTCAAATGTTTTTCACCTCAAATTCGAGTGCAAGTAGGGGTAGCAATGTTCGGGTACAAAGGTTTGATTCCGCTGAATCTGAGGTGGTCCAAATGGTCAGTAGCTGGGGAGCTGACTTGGAGGATACTGGCTTACATCCCTATGGTGCCAACTTTGGGGACTATCTCGATGCTAGACAATTCGAAGATTTTCTTGAGCATCTTGCTGAGAATGACAATTCGAGACGAGGAGCACCTCCTGCATCTTTGTCATTTGTGAACAATCTGCCCCGCGTAGTCGTTGACAAGGACCATGAGAAGCATGGTGAACTAGTTTGTGCCATTTGCAAGGATGCATTGGTACTTGGGACTGAAGCTAGTCAGCTTCCGTGCTCTCACCTTTATCATGGAAGTTGCATTTTACCGTGGTTGAGCACACGGAATTCATGTCCTCTCTGCCGCCATGAGCTTCCAACTGATGACAAAGATTACGAAGAGGGAAAGCAGAACGGTGTTCTTCGACATGTAAACCATGACAGGCAGCAACTAGAGATGGTGGATGTGGATGATAGTTCCTCTGATGTCTCTGTCTTGGCTGAAGTAAACGAAGCAGATAGTATTAGTCAAAGTGTAATACATCATACAGAAGTTGTAAGTTCGAATTCTTCCACAAATTCTTCGGCAGTAAGAGGTGGTAGAGGAAGATGGTTTTTTCTTGCCGCGGCTCCAATAGTTAGTTTAGTTGGCATTGTGCTTGTCCTGTGGTTAGGTAACTCACAGATTGAAGGGAATAGGCATCTCAGCGGGCGCAACATGTCCGCACAAGATCATCATACCACCAATGTTTATGCCACACCCGTCCAAAGGGAGAGCAGAAGCAGAAGATGGTGGTGCCCTTTCTAA 1638 0.4628 MSANSENVGVCSLCQKALSPDNEMTSDPATVGVCGDCKFLLLEDYGNHMVTPQSLQRRFRGRFRRNSSESVDNMVNNLRQSRSATASLEDVQQIVEGDAAAWATQHASLHNTPSGSRRWRRVLSDTDSDGFDNWSSLYGENESNESFRRYRIPHGETDSLSFSAYGGDSDVSVDRHSIIHRGMFGLPDVGDEFDSDTDIDPMHAGVSHWHSDDMEDDEEEEEDNEDDDEEEEEDVQGEWEIADAVEAEATARLQMFFTSNSSASRGSNVRVQRFDSAESEVVQMVSSWGADLEDTGLHPYGANFGDYLDARQFEDFLEHLAENDNSRRGAPPASLSFVNNLPRVVVDKDHEKHGELVCAICKDALVLGTEASQLPCSHLYHGSCILPWLSTRNSCPLCRHELPTDDKDYEEGKQNGVLRHVNHDRQQLEMVDVDDSSSDVSVLAEVNEADSISQSVIHHTEVVSSNSSTNSSAVRGGRGRWFFLAAAPIVSLVGIVLVLWLGNSQIEGNRHLSGRNMSAQDHHTTNVYATPVQRESRSRRWWCPF* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2202 545 ProSiteProfiles Zinc finger RING-type profile. 358 399 IPR001841 -
Ahy14g2202 545 MobiDBLite consensus disorder prediction 192 237 - -
Ahy14g2202 545 Coils Coil 211 234 - -
Ahy14g2202 545 SUPERFAMILY RING/U-box 340 405 - -
Ahy14g2202 545 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 318 405 IPR013083 -
Ahy14g2202 545 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 294 464 - -
Ahy14g2202 545 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1 294 464 - -
Ahy14g2202 545 Pfam Ring finger domain 358 399 IPR001841 -
Ahy14g2202 545 MobiDBLite consensus disorder prediction 213 237 - -
Ahy14g2202 545 SMART ring_2 358 398 IPR001841 -
Ahy14g2202 545 MobiDBLite consensus disorder prediction 196 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2202 Ahy-Chr14 121341582 121344357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2202 1 545 C3H Transcription Factor Family AT5G01980 39.860 1.11e-110 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2202 - - gmx:100800933 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2202 14 121341582 121344357 Ahy14g2202 14 121341582 121344357 ECH
Ahy14g2202 14 121341582 121344357 Ahy4g1932 4 111024391 111027382 hybridization