Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2176 ATGAAGACGTTTTCTCCCTCCGACACCTTTTACTGGTACAAGAATGAAGACGTTTCCTCGTACCGAGGTGGCTTGGAGCTGTGGAACCATCATCATCATCATCACCAACCGGAACACAATCTCATACCTCAAACAAGGCCTCTCTTCCACCAAAATTTTTACAGTTCCGCGACTGCTCTAGGAGTGGGTCCAACCACCGTGTCCGACGATCAGTCACCCTCGAGATCGGCCTTCCTGGTGACGGCGTCGGCCGTGGGGAGCGGAGCAGGAAGTGGAGCAGAAAGTGGAGCAGGTAAGATTAGCTGCCAGGACTGTGGGAACCAGGTGAAAAAGGATTGCCCTCACATGCGGTGCAGGACATGCTGCAAGAGTCGTGGCTTCGATTGCCAAACCCATGTCAAGAGCACTTCGGTTCCCACTTTCAAGTGCCGCGAGAGGCAGCAGCAACTCGCCTCTATCCAACAACAACAGCTTCTTGCTGCTGATGTTCTCAAGCGCCAAAGAGATCATGTCTAG 516 0.531 MKTFSPSDTFYWYKNEDVSSYRGGLELWNHHHHHHQPEHNLIPQTRPLFHQNFYSSATALGVGPTTVSDDQSPSRSAFLVTASAVGSGAGSGAESGAGKISCQDCGNQVKKDCPHMRCRTCCKSRGFDCQTHVKSTSVPTFKCRERQQQLASIQQQQLLAADVLKRQRDHV* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2176 171 Pfam Domain of unknown function (DUF702) 99 160 - -
Ahy14g2176 171 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 101 141 IPR006510 -
Ahy14g2176 171 PANTHER TRANSCRIPTION FACTOR STY-LRP1 FAMILY-RELATED 5 161 - -
Ahy14g2176 171 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 5 161 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2176 Ahy-Chr14 120624967 120626140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2176 5 171 C2H2 Transcription Factor Family AT5G66350 42.857 1.09e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Ahy14g2176 DUF702 1.10E-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2176 - - aip:107636969 326.635