Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2124 ATGTTTTTCCAACGGACAACGATCACACATGTAAACAACCCAAGCTACCCTCTTGAAGCATTCCGTTTCAGGTCTATTTTGGATTTGTTGAATGCTGAAAGATTGGACGATACATATCTGTTTGACATGATTGCTGAAGTAGTTGGAAAGGAAGATCAAAGGGATTTGGTTACCAGTACAGGCAAGGAAACCAAACGTATGGCTGTTGTGTTAGAAGACTTAGAGAACAACAGGATTGGGTGTACTTTGTTCGGGGAGATGGTGGATCAAATCCGACCACACCTTGAAGAAGGAAGTGTGGAACCCCTTATTGTTGTGCTGCAATTATTCAAAGCATCCCAGTGGAACGGCAAAACCACTGTTCAGAGTCACTTTTACATCTCCAAGATCCACATTGAGAGGGATTTAAAAGAGGTGGTTTGTTTTAGGAACAGGCTCCTGAGTGCTGATGAACTGAAGCAGGGGTCTGTTGGAGTGAAGACCATCGAAGAGGCCCTAAATGCTGCAGAGGTAGCTATATGTTGGATTGCTACAACCATTGTTTCTATCAATGCTGGGAAGAATGATTGGTTCTACAAAGCATGTAAAAAGTGCCCAAAAAAAGTTGAAACTTCTACTATTGAAAGATATGAATGTAAGGGTTGTGGACACACAGCAGGAACTGCCTCAATTAGGTACAAGGTTGAGGTGATTGTCTATGATGGTACTGACAGTATGACTTTGCTCCTTTGGGATAGGGAAGCAATTCAACTTTGCAGAAAGAGGGCAGATCAAATAAAGGAAGAGGAAATTAATATAAAATCAGCCAACATCGATCAATATGACCAAGTTTATACTATTGGCAAAGTTTGTGATGATGAGGACATCATAGAAAAGAACCTCCCAAAAGAATCAAATACTAATTCATCTGTTAATCTCACTGAAATCGGATGCAATGATTCCCTCGAGATCGCAGAAAATGTGGCCGATATTAAGACTGATAGCAATAATCTGTGTGATGTTTCAAGCCTCAAGTACAAGACCCCTGCTAAAAGAGCTCTCAATGGTGTAAAGTCAAGCACAACAACCATTAATGAACATGATGAAGAAGGGCAGCTCTCAACCAATAGGTTCAGCCATAAGGGGGGCAAGAAGCAAAAGAGCCAACTGATAGATGTGGCTAACTGA 1167 0.4122 MFFQRTTITHVNNPSYPLEAFRFRSILDLLNAERLDDTYLFDMIAEVVGKEDQRDLVTSTGKETKRMAVVLEDLENNRIGCTLFGEMVDQIRPHLEEGSVEPLIVVLQLFKASQWNGKTTVQSHFYISKIHIERDLKEVVCFRNRLLSADELKQGSVGVKTIEEALNAAEVAICWIATTIVSINAGKNDWFYKACKKCPKKVETSTIERYECKGCGHTAGTASIRYKVEVIVYDGTDSMTLLLWDREAIQLCRKRADQIKEEEINIKSANIDQYDQVYTIGKVCDDEDIIEKNLPKESNTNSSVNLTEIGCNDSLEIAENVADIKTDSNNLCDVSSLKYKTPAKRALNGVKSSTTTINEHDEEGQLSTNRFSHKGGKKQKSQLIDVAN* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2124 388 Gene3D - 151 305 IPR012340 -
Ahy14g2124 388 PANTHER REPLICATION FACTOR A 1, RFA1 2 347 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy14g2124 388 CDD RPA1_DBD_B_like 48 146 - -
Ahy14g2124 388 MobiDBLite consensus disorder prediction 351 388 - -
Ahy14g2124 388 SUPERFAMILY Nucleic acid-binding proteins 23 146 IPR012340 -
Ahy14g2124 388 Pfam Replication factor-A C terminal domain 180 264 IPR013955 -
Ahy14g2124 388 Gene3D - 16 150 IPR012340 -
Ahy14g2124 388 PANTHER BNAC07G49340D PROTEIN 2 347 - -
Ahy14g2124 388 SUPERFAMILY Nucleic acid-binding proteins 160 263 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2124 Ahy-Chr14 119271742 119274263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2124 15 236 Core DNA Replication Machinery Family AT2G06510 26.378 3.63e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2124 - - ahf:112743018 776.933