Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2082 ATGGCTTCTAGTAGGGAGAGAAGAAGGGAGGCTCTTCAACAAAAGTTGAATCAACTCCGAGATGTTACAAATTCTAGTGGTGTGAACAAAGCTTCAATTATTGTGGACGCATCCAGATACATAGAGGAGTTGAAGCAAAAAGTGGAGGGACTGAATTCCGAGCTTGTAATCCCTGAAACTTCTTCGTCAACCTCTCAAATTGATGATGAACTACCTATGGTGACAGTGGAAACCCTAGAAAAAGGTTTCCACATTAACGTGTATTCAGAGAAGAATTGCCCTGGTATGTTGGTCTCAATACTAAAAGCATTTGAAGAGCTTGGACTTGATGTTCTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCAGCTTCAAGCAGTGGGTGGAGAAAGTCAAAAGAACAATGATACTATTGACGCACAAGTGGTGAAGCAAGCAGTGATGCAAGCAATCAACAAAAGTAATTACTAA 471 0.4076 MASSRERRREALQQKLNQLRDVTNSSGVNKASIIVDASRYIEELKQKVEGLNSELVIPETSSSTSQIDDELPMVTVETLEKGFHINVYSEKNCPGMLVSILKAFEELGLDVLDARVSCEDTFQLQAVGGESQKNNDTIDAQVVKQAVMQAINKSNY* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2082 156 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 55 IPR036638 GO:0046983
Ahy14g2082 156 Gene3D - 2 58 IPR036638 GO:0046983
Ahy14g2082 156 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 154 - -
Ahy14g2082 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 154 - -
Ahy14g2082 156 CDD ACT_UUR-ACR-like 94 151 - -
Ahy14g2082 156 Coils Coil 34 54 - -
Ahy14g2082 156 Coils Coil 2 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2082 Ahy-Chr14 117828546 117832382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2082 7 124 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 31.333 1.99e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2082 - - gmx:100527466 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2082 14 117828546 117832382 Ahy17g1350 17 22793128 22797203 ECH
Ahy14g2082 14 117828546 117832382 Ahy20g1270 20 25048165 25050837 ECH
Ahy14g2082 14 117828546 117832382 Ahy14g2082 14 117828546 117832382 ECH
Ahy14g2082 14 117828546 117832382 Ahy11g0297 11 3323198 3326553 ECH
Ahy14g2082 14 117828546 117832382 Ahy4g1803 4 106754642 106757984 hybridization