Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2070 ATGGGGCAAAGGACAGAGAAGAAACCACCAGCCATCTATGGATATTTTGATCGTCATGTCCACCAGAGTTTACTTCAAGCATGGTGTCAATTCAATTTCCTGTCAACCTCATTGCATTCAATAAGCTCAAATGAGAGGGTAGAGCAAGCAAGTATGCTACCTAGGACAAGTATTGATGGTTTTCGTGTTAGTGTGTCAAGTACACCTAGCTGTTCAAGTGGGGGATCGGGACCAGAGGACATCGAGTCTCTAGGTGATCTTTATATATGGGGACAAATTTGGGCAGATGTTTCACCTGATAGTTTTGGGACTCAGCTCCCTCCCATGACTGATGTTTTGCTTCCTAAACCGTTAGAGGCAAATATTGTTCTTGATGTTCAACAGATTGCATCTGGTGTCCACCACATTGCTTTAGTTACAAGGCAAGGTGAAGTTTTCACTTGGGGAGAGGAATCTGGGGGAAGACTTGGTCATGGAATCGATAAAGATTTTGGTCAACCCCATCTTGTTGAGTTCTTGGCAGTTACTAATGTGGATTATGTTGCATGTGGAGAGAACCATACATGTGCTCTGACTACATCAGATGAGCTATATTCTTGGGGTGATGGTGCATATAATGTTGGACTTCTTGGCCATGGTTCGGATTCTAGCCATTGGATACCAAAGAGAGTTAGTGGCCCTCTAGAAGGACATCAAGTTATATCTGTTGCGTGTGGCACATGGCATTCGGCATTGGCAACTGCCAATGGAAAACTTTTTACGTTCGGTGATGGAACATTTGGTGTCTTAGGTCATGGAGATAGAGAGAGTGTGTTATATCCAAAGGAAGTGCAGTTATTAAGTGGATTGAGGACACTTAAAGTTGCATGTGGAGTATGGCACACTGCAGCTATTGTAGAGGTAACACTTCAGTCTAGTTCAAATGTTTCATCAAGGAAGCTCTTTACTTGGGGTGATGGTGATAAGTATCGTTTGGGGCATGGAAACAAGGAAACATACCTTCAACCGACTTGTGTCTCATCTCTTATAGAATTAAATTTCCACCAGATAGCATGTGGAAACACTATGACTGTTGCCCTCACTACATCGGGTCATATTTTCACTATGGGAGGCACTGAACATGGTCAACTAGGAAATCCTTTGTCCGATGGAAAAGTACCAATGCTAGTACAAGATAAGTTGGTAGGTGAGTATGTTGAGGAAATATCATGTGGATCTCATCATGTGGCTGTATTGACATCAAGAAGTGAACTATATACATGGGGGAAAGGTGCCAATGGAAGATTGGGACATGGAGACACAGAAGATAGGAAGGGTCCAACAATAGTGGAAGCCTTGAAAGAAAGGCATGTAAAAAACATTTCGTGTGGGTCGAAGTTTACAACTTGCATATGCATCCATAAATGGGTCTCAGGAGTTGACCAATCTAGTTGTACTGCATGTAGGCAACCATTTGGATTTACTAGAAAAAGGCACAATTGTTATAATTGTGGGTTAGTGCATTGCCATGGTTGTAGTTCAAAAAAGGCATTGAGGGCAGCGTTGGCTCCAACACCCGGAAAACCTCATCGTGTGTGTGATTCTTGTTATACTAAGATTAAAAATGTTGAGTCGAATTCTGGTGCCATTTTTAATAGAAGAGCTACTACTCCACCTCGTACTTCTATAGATGGAAGGGAAAGATTTACCCTGGGAGAAATAAGATCTTCAAGAACTCTCTTCCCTCTCTCAAGGATTCACAAGACTACTACAGAGCAAGTTGTTCAGGTTCCATCACTAGTGCAATTGAAAGATGTTGCATTCCCAAGTTCAACAGGTTCAATAATGCAAAATCTTTTGAAGCCTACCATCGCTGCCATACCTCCAACTCCAAGTCCACCACCAACTCCACCACTCATTTCAAGGCCCGCATCCCCGTATGCAAGAAGGCCAAGCCCTACGCGTTCCGGCACTGGTGGATTCTCTAGAAGTCTTATTGATAGTTTGAGGAAAACAAATGAGCTTAAGAATCAAGAAGTGTCAAAATTGCAGAAACAAATTCAAAGTTTGAAACAGAAAAGTGACATGAAAGATGTGGAAAATCAAAAGCTTCGCCAACATATTAAGGAAGCTACAACATTGGCAGCAGATGAGTCTTCTAAGCATAAAGCAATGCTAGAAATTTTTGAGTGCACTATTATTCAGTTGAAGCAAATGGCTGAGAAGTTGCCACCAGAGATTTTAGAAACTGAAAATTTGAGAATTGCACTTACTCAAGCTGAAGATTTTCTGAAAGAAAACTCGACATCTGAAACATTTTCCGCGCCATCAATATCAGAGTCTACTCGACAAAATGCACCTGATCCTGCCACAGATATTGGGGATTCAAAAATGCAAGAGCACAATACAGAAGAAAATCATGAAACGGCGGCTTCGGACCCATCTCATGATGAGGGGAATGTCCTTCAAGAAAGAAATGGATCATCTGTATCCGATAATAGAACAGCAGTGCAACCACAAAGCTCCGAGGAGACGTCAAGGTTGGCAAGAGATGGAGAAACACAAGTTATTGAACAATTTGAGCCTGGTGTTTACGTGACACTAATAGTAAGGCCTAATGGTGTCAAAATTTTCAGGAGAGTTAGATTCAGCAAGCGAAGGTTTCATGAGCAACAAGCAGAAGAATGGTGGAACATAAATAAAGAGAGGGTGCTTCAGAGATATGGTCAACAAGCTAGAAGTGATGCTAATGCATCATCTAGCATCCCGGCACCACCTACTGAAGAAAATATTGAGGCAGCACCTACCTAA 2790 0.4201 MGQRTEKKPPAIYGYFDRHVHQSLLQAWCQFNFLSTSLHSISSNERVEQASMLPRTSIDGFRVSVSSTPSCSSGGSGPEDIESLGDLYIWGQIWADVSPDSFGTQLPPMTDVLLPKPLEANIVLDVQQIASGVHHIALVTRQGEVFTWGEESGGRLGHGIDKDFGQPHLVEFLAVTNVDYVACGENHTCALTTSDELYSWGDGAYNVGLLGHGSDSSHWIPKRVSGPLEGHQVISVACGTWHSALATANGKLFTFGDGTFGVLGHGDRESVLYPKEVQLLSGLRTLKVACGVWHTAAIVEVTLQSSSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSSLIELNFHQIACGNTMTVALTTSGHIFTMGGTEHGQLGNPLSDGKVPMLVQDKLVGEYVEEISCGSHHVAVLTSRSELYTWGKGANGRLGHGDTEDRKGPTIVEALKERHVKNISCGSKFTTCICIHKWVSGVDQSSCTACRQPFGFTRKRHNCYNCGLVHCHGCSSKKALRAALAPTPGKPHRVCDSCYTKIKNVESNSGAIFNRRATTPPRTSIDGRERFTLGEIRSSRTLFPLSRIHKTTTEQVVQVPSLVQLKDVAFPSSTGSIMQNLLKPTIAAIPPTPSPPPTPPLISRPASPYARRPSPTRSGTGGFSRSLIDSLRKTNELKNQEVSKLQKQIQSLKQKSDMKDVENQKLRQHIKEATTLAADESSKHKAMLEIFECTIIQLKQMAEKLPPEILETENLRIALTQAEDFLKENSTSETFSAPSISESTRQNAPDPATDIGDSKMQEHNTEENHETAASDPSHDEGNVLQERNGSSVSDNRTAVQPQSSEETSRLARDGETQVIEQFEPGVYVTLIVRPNGVKIFRRVRFSKRRFHEQQAEEWWNINKERVLQRYGQQARSDANASSSIPAPPTEENIEAAPT* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2070 929 SMART fyve_4 466 535 IPR000306 GO:0046872
Ahy14g2070 929 MobiDBLite consensus disorder prediction 759 782 - -
Ahy14g2070 929 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 288 298 IPR000408 -
Ahy14g2070 929 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 143 194 IPR000408 -
Ahy14g2070 929 Coils Coil 659 686 - -
Ahy14g2070 929 MobiDBLite consensus disorder prediction 787 813 - -
Ahy14g2070 929 SUPERFAMILY RCC1/BLIP-II 84 469 IPR009091 -
Ahy14g2070 929 Pfam Regulator of chromosome condensation (RCC1) repeat 417 464 IPR000408 -
Ahy14g2070 929 Pfam Regulator of chromosome condensation (RCC1) repeat 314 360 IPR000408 -
Ahy14g2070 929 Pfam Regulator of chromosome condensation (RCC1) repeat 143 191 IPR000408 -
Ahy14g2070 929 Pfam Regulator of chromosome condensation (RCC1) repeat 195 245 IPR000408 -
Ahy14g2070 929 Pfam Regulator of chromosome condensation (RCC1) repeat 249 298 IPR000408 -
Ahy14g2070 929 Pfam Regulator of chromosome condensation (RCC1) repeat 363 412 IPR000408 -
Ahy14g2070 929 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 364 415 IPR000408 -
Ahy14g2070 929 SUPERFAMILY FYVE/PHD zinc finger 468 540 IPR011011 -
Ahy14g2070 929 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 470 543 IPR013083 -
Ahy14g2070 929 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 250 301 IPR000408 -
Ahy14g2070 929 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 40 901 - -
Ahy14g2070 929 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 416 467 IPR000408 -
Ahy14g2070 929 MobiDBLite consensus disorder prediction 814 838 - -
Ahy14g2070 929 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 129 139 IPR000408 -
Ahy14g2070 929 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 312 363 IPR000408 -
Ahy14g2070 929 ProSiteProfiles BRX domain profile. 847 902 IPR013591 -
Ahy14g2070 929 CDD FYVE_like_SF 477 530 - -
Ahy14g2070 929 MobiDBLite consensus disorder prediction 619 637 - -
Ahy14g2070 929 Pfam Transcription factor regulating root and shoot growth via Pin3 847 901 IPR013591 -
Ahy14g2070 929 Gene3D - 206 468 IPR009091 -
Ahy14g2070 929 Gene3D - 64 205 IPR009091 -
Ahy14g2070 929 MobiDBLite consensus disorder prediction 619 656 - -
Ahy14g2070 929 MobiDBLite consensus disorder prediction 759 847 - -
Ahy14g2070 929 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 195 249 IPR000408 -
Ahy14g2070 929 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 472 534 IPR017455 -
Ahy14g2070 929 MobiDBLite consensus disorder prediction 901 919 - -
Ahy14g2070 929 Pfam FYVE zinc finger 468 534 IPR000306 GO:0046872
Ahy14g2070 929 MobiDBLite consensus disorder prediction 901 929 - -
Ahy14g2070 929 PRINTS Chromosome condensation regulator RCC1 signature 125 138 IPR000408 -
Ahy14g2070 929 PRINTS Chromosome condensation regulator RCC1 signature 353 371 IPR000408 -
Ahy14g2070 929 PRINTS Chromosome condensation regulator RCC1 signature 195 211 IPR000408 -
Ahy14g2070 929 PRINTS Chromosome condensation regulator RCC1 signature 252 266 IPR000408 -
Ahy14g2070 929 PRINTS Chromosome condensation regulator RCC1 signature 411 432 IPR000408 -
Ahy14g2070 929 PRINTS Chromosome condensation regulator RCC1 signature 236 252 IPR000408 -
Ahy14g2070 929 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-CONTAINING PROTEIN 40 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2070 Ahy-Chr14 117257679 117263226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2070 808 904 Major Intrinsic Protein MIP AT1G31880 30.928 1.08e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2070 - - ahf:112742992 1825.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2070 14 117257679 117263226 Ahy4g1794 4 106276443 106280080 hybridization