Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1993 ATGTCACGCATCCTCAACAACAACAAAAAGACTGAAACTATTCCTAGAATTTTGGTGTTTGCTGTAGAAATAGGAGATCGCGTAGGAGACGCACTGGAAGTAGAGAGTATTCTTGAGAAATGGAAGGAGTACAATAAGCAGCAACAACAACTCATAAGTGAAGGAGATGAGGTTGAAGTGATTCACAAAGTTCCTGCAAAGGGATCCAGAAAAGGGTGTATGAGAGGTAAAGGTGGACCACAGAATTATGATTATAAATTCAGGGGTGTGAGGCAGAGGATTTGGGGCAAATGGGTTGCAGAAATCCGCAAACCTATCAACAGCAAGCATGTTGGTGAAAAAGCAAACAGGCTTTGGCTTGGAACTTTTTCTACTGCACTTGAAGCTGCTTTTGCTTATGATGAAGCAGCAAGGACCATGTATGGCCCTGGCGCTCGTTTGAACTTTCCTCACCATTATGGCATAAAATCAATAGGTTCTAATGGATCATCTATTAGTACAGGATTTGATCAAAAATCACCAAGTGGAACCTATGTAGATATTTTGAACAGTGATAATGTTGCAAAAGTTGATTGGTTGGAGGGGAATCTCGGTATGGGTCTGGAAGAACAACTTAAGTTTTCTCAGGCAAACGAATTATTGGAGATGGAATGTGAGGGAGGAATTCTTCAAGAGCCTTTTAAGTATGGGATGACGGAGAAGAGTGAAGTGGAAAATTACAAATCTAGTAATGAGTTGAACTGCACAAACCATTGCTTTGGATATTTGCATAATATGATTCCAAACAGTAATCCAAAGTATGAGCAGTTCAATAATCTCAAATCTGAGGCAACTATTCCAACCAAAGATATGGAGGGAGTACTTGCAGAAATTCTGCAGTTTTACAGAACATGTTCCGAGATGAATAATAGAAGTAATTATCTAGTTACGAGTGGTACTTTTGGATCAATTGCAAATGTGTCAGAAAATGAGGATTTGAATATCAATAATACTAATAAGGACTCTACATTACAAGAGAAAAGAAATCATGAAAATTCAGAGTGCGGATGTAGCTCTGGGCAGAGTAGGAAGTGTTCTGATACTAGGTGTTCTGATACTTCGCAACAGTTGCAAAATTTGGGTGGTTACTTACCTGAACACTTGAATAATATACAGTTTGCAGACATGGAAGTAGGTCATGATTATAGTTTCTTGAGTCCAGACTATGACTTTGGTTTATTGGAAGAGAAGAAATTACTTGATGTGTGCTTTTCACGTAGAAGATCTAGATCGTGA 1275 0.3867 MSRILNNNKKTETIPRILVFAVEIGDRVGDALEVESILEKWKEYNKQQQQLISEGDEVEVIHKVPAKGSRKGCMRGKGGPQNYDYKFRGVRQRIWGKWVAEIRKPINSKHVGEKANRLWLGTFSTALEAAFAYDEAARTMYGPGARLNFPHHYGIKSIGSNGSSISTGFDQKSPSGTYVDILNSDNVAKVDWLEGNLGMGLEEQLKFSQANELLEMECEGGILQEPFKYGMTEKSEVENYKSSNELNCTNHCFGYLHNMIPNSNPKYEQFNNLKSEATIPTKDMEGVLAEILQFYRTCSEMNNRSNYLVTSGTFGSIANVSENEDLNINNTNKDSTLQEKRNHENSECGCSSGQSRKCSDTRCSDTSQQLQNLGGYLPEHLNNIQFADMEVGHDYSFLSPDYDFGLLEEKKLLDVCFSRRRSRS* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1993 424 SUPERFAMILY DNA-binding domain 86 151 IPR016177 GO:0003677
Ahy14g1993 424 ProSiteProfiles AP2/ERF domain profile. 86 150 IPR001471 GO:0003700|GO:0006355
Ahy14g1993 424 PRINTS Ethylene responsive element binding protein signature 116 132 IPR001471 GO:0003700|GO:0006355
Ahy14g1993 424 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Ahy14g1993 424 Pfam AP2 domain 86 142 IPR001471 GO:0003700|GO:0006355
Ahy14g1993 424 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 29 372 - -
Ahy14g1993 424 CDD AP2 86 152 IPR001471 GO:0003700|GO:0006355
Ahy14g1993 424 Gene3D AP2/ERF domain 85 152 IPR036955 GO:0003700|GO:0006355
Ahy14g1993 424 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 29 372 - -
Ahy14g1993 424 SMART rav1_2 86 156 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1993 Ahy-Chr14 112907523 112909278 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1993 33 151 AP2-EREBP Transcription Factor Family AT2G40340 55.000 1.19e-36 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy14g1993 AP2 2.60E-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1993 - - aip:107636903 763.066