Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1986 ATGAAGACTGAAACTATTCCTAGAAATAGGAGATCGCGCAGGAGACGCAGTGGAGGAAGTGACTCAGTAGAGAGTACTCTTGAGAAGTGGAAGGAGTACAATAAACAGCAACAACAACTAATCAGTGAAGGAGATGAGGTTGAAGTGATTCACAAGGTTCCTGCAAAGGGATCGAAAAAAGGATGTATGAAAGGCAAAGGTGGACCACAGAATTATGATTGCAAGTTCAGGGGTGTGAGGCAGAGGATTTGGGGCAAATGGGTTGCAGAAATCCGCAAACCTATCCATAGCAAGCGTGTTGGTGAAGAATCAAACAGGCTTTGGCTTGGAACCTTTTCTACTGCACTTGAAGCTGCTCTTGCTTATGATGAAGCAGCAAGGACCATGTATGGCCCTAGCGCTCGTTTGAACTTCCCTCACCATCATGGCATAGAATTAGTAAGTTCTAATGGATCATCTAGTAGTACAGGATTTGATCAGAAATCACCAAGTGGAACCTATATAGATACTTTGAATGGTGGTGATGCTGCAAAAGTTGACGGGTTGGAGGGGAATCTTGATATGGGTCTCGAAGAACAACTCAAGTTTTCTGAGGTAAATGAATTATTGGAGATGGAATGTGAGGAAGGAATTCTTCAAGGGCCTTTTAAGTATGTAAAGGATGAAGTTGCTGGAGGAAGTGAAGGACTGGAAGGAGAGTTAGAGAAGGTTTTGAAGAACTCTGGTATAGTTGAAGAGTGTAATAATTACATGCTTGAGGATTCTATGTGCATGGCTGTAAATATAGGAGCTGATTATAACTCTTGTGATGCTACTGAACAGGGGATTATGGGGAAGAGTGAAGTGGAAAATTACAAATCCTGCAATGAGTTGAGCTGCACAAACCATTGCTTTGGATACTTGCATAATATGATTCCAAACAGTAATCCTATGATACCAAACAGTAATCCAAAGTATGAGCAGTTCAGCAATCTCAAATCTGAGGCATCTATTCCGACAAAAGATATGGAGGAAGTACTTGCAGAAATTCTACAGTTTTGCAAGCAAGTGCTCCAAGGTAAGTAA 1065 0.415 MKTETIPRNRRSRRRRSGGSDSVESTLEKWKEYNKQQQQLISEGDEVEVIHKVPAKGSKKGCMKGKGGPQNYDCKFRGVRQRIWGKWVAEIRKPIHSKRVGEESNRLWLGTFSTALEAALAYDEAARTMYGPSARLNFPHHHGIELVSSNGSSSSTGFDQKSPSGTYIDTLNGGDAAKVDGLEGNLDMGLEEQLKFSEVNELLEMECEEGILQGPFKYVKDEVAGGSEGLEGELEKVLKNSGIVEECNNYMLEDSMCMAVNIGADYNSCDATEQGIMGKSEVENYKSCNELSCTNHCFGYLHNMIPNSNPMIPNSNPKYEQFSNLKSEASIPTKDMEEVLAEILQFCKQVLQGK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1986 354 Gene3D AP2/ERF domain 74 140 IPR036955 GO:0003700|GO:0006355
Ahy14g1986 354 ProSiteProfiles AP2/ERF domain profile. 75 139 IPR001471 GO:0003700|GO:0006355
Ahy14g1986 354 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 9 323 - -
Ahy14g1986 354 Pfam AP2 domain 74 131 IPR001471 GO:0003700|GO:0006355
Ahy14g1986 354 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 9 323 - -
Ahy14g1986 354 MobiDBLite consensus disorder prediction 1 26 - -
Ahy14g1986 354 SUPERFAMILY DNA-binding domain 75 140 IPR016177 GO:0003677
Ahy14g1986 354 SMART rav1_2 75 145 IPR001471 GO:0003700|GO:0006355
Ahy14g1986 354 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Ahy14g1986 354 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Ahy14g1986 354 CDD AP2 74 141 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1986 Ahy-Chr14 112701325 112703443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1986 13 156 AP2-EREBP Transcription Factor Family AT2G40340 51.724 2.15e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy14g1986 AP2 5.40E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1986 - - aip:107637982 652.514