Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1897 ATGGAAAGTCATCATCTCCATCATCATCATCATCATCATCATCAACAACAATACCCACCGCCACAACATCATAGTATTAGTGCAGCAACAACAACGAGTGCAGGAACTAATAACAACGTTGTGGTTGTTGATGTGACAGGAGATAGTAGGTTCCCTCAATGGAGCATCCAAGAAACAAAGGAGTTCCTAATGATCCGTGCGGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAGCAGCTCTGGGAAGTCATCTCCAACACCATGAAAGAAAAGGGTTTCCATCGAAGCGCTGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACCCGTTATAAGGGATGTGAAACGATGGAGGCAGAAGCAATGAGGCAGCAATTCCCATTCTACAACGAGCTTCAAGCTATCTTCACCGATAGAATGCAGAGGATGCTTTGGGCCGAAGCAGAAGGCGGAGGCGGAGGCGGAGGAGGAGGAGGAGGTTCTTCTACTAACAAGAAGAAAGCTGCGACGGCGCAGCTGTCTTCGGACGAAGAAGAAGAGGAAGAGAGCGAATTAGGAGATCCTCAACAAAAGAATGTAAAAAGAAAGAAAAGATTAAAGAAGGTTAAGAGGGTGGAAGATAGTGGTGGTGCGAGTAATTTGAAGCATCTGAAGGGGATTCTGGAGGAGTTTATGAGGCAACAGATGGAGATGGAGGCGCAATGGATGTCGGCATTCGAGGCGAGGGAGAATGATCGGAGGTTGAAGGAGTTGGAATGGAGGCAGACAATGGAGGCTTTGGAGAATCAGAGGATAATGATGGAGCAGAGATGGAGGGAGAGTGAAGAACAATGGAGGATTAGGGAAGAAGATAGGGCTCATAAGAGAGATGCTCTTATCACTGCACTTCTCAACAAGCTTTCAAGACAACAAGATCAATAA 927 0.4639 MESHHLHHHHHHHHQQQYPPPQHHSISAATTTSAGTNNNVVVVDVTGDSRFPQWSIQETKEFLMIRAELDQTFMETKRNKQLWEVISNTMKEKGFHRSAEQCKCKWKNLVTRYKGCETMEAEAMRQQFPFYNELQAIFTDRMQRMLWAEAEGGGGGGGGGGGSSTNKKKAATAQLSSDEEEEEESELGDPQQKNVKRKKRLKKVKRVEDSGGASNLKHLKGILEEFMRQQMEMEAQWMSAFEARENDRRLKELEWRQTMEALENQRIMMEQRWRESEEQWRIREEDRAHKRDALITALLNKLSRQQDQ* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1897 308 CDD GT1 52 117 - -
Ahy14g1897 308 MobiDBLite consensus disorder prediction 149 210 - -
Ahy14g1897 308 MobiDBLite consensus disorder prediction 19 33 - -
Ahy14g1897 308 Coils Coil 259 279 - -
Ahy14g1897 308 ProSiteProfiles Myb-like domain profile. 54 110 IPR001005 -
Ahy14g1897 308 MobiDBLite consensus disorder prediction 1 33 - -
Ahy14g1897 308 Gene3D - 54 115 - -
Ahy14g1897 308 PANTHER - 31 305 - -
Ahy14g1897 308 MobiDBLite consensus disorder prediction 1 18 - -
Ahy14g1897 308 Pfam Myb/SANT-like DNA-binding domain 53 137 IPR044822 -
Ahy14g1897 308 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 31 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1897 Ahy-Chr14 108372485 108374202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1897 8 304 Trihelix Transcription Factor Family AT2G38250 51.852 1.45e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy14g1897 Myb_DNA-bind_4 7.10E-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1897 - - aip:107637926 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1897 14 108372485 108374202 Ahy14g1897 14 108372485 108374202 ECH
Ahy14g1897 14 108372485 108374202 Ahy4g1675 4 99602840 99604496 hybridization