Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1887 ATGGGTGTCGACTACTACAAAATTCTTGATGTCGATAGAAACGCTAAAGACGATGATCTCAAGAAGGCGTATCGAAAGCTTGCAATGAAGTGGCACCCTGATAAGAACCCTAACAACAAGAAGGACGCTGAGACCAAATTCAAGCAAATCTCCGAAGCCTATGATATTTTGAGTGATCCTCAGAAGCGTGCAGTTTATGATCAGTATGGTGAGGAGGGGCTGAAGGGGCAGGTACCACCACCAGGTGGTGGCAGTGACAGCAGTTCTGCGAATTTCCGGTTCAATCCCAGAAGTGCAGATGATATATTTTCGGAGTTCTTTGGTTTCTCCAGTTCATTTGGTGGAATGGGGGACATGGGTGGTCGCGCTGGCCCATCTAGCTTTTCCAGGGGCGGCATGTTTGGTGATGATATCTTTGCTCAGTTTAGGAGTGGAGCTGGAGAGGGCTCTGCCCATATGCCAAGGAAAAGTGCACCAATAGAGATAACATTGCTATGTAGCTTGGAGGATTTGTATAAAGGGACAACAAAAAAGATGAAGATTTCGAGGGATGTTATTGATGCCAATGGAAGGCCCACCAAAGTAGAGGAAATCCTTACAATTGAGATCAAACCAGGTTGGAAGAAAGGAACAAAAATAACTTTTCCAGCGAAGGGAAATGAGCAAAGAGGACATATCCCCGCAGACCTTGTGTTCATCATCGACGAGAAGCCGCATAGTGTCTTCAAGAGGGATGGCAATGATCTTGTTTTCACCCAGAAGGTATCCCTTGTAGAAGCTCTAACAGGTTACACGGTGCAGCTGACAACCCTTGATGGCCGAAACCTTACCATCCCCGTTAATTCAATCATTAGTCCGTCTTACGAAGAAGTCATTAAAGGAGAGGGCATGCCAATTCCTAAAGAACCCTCCAAGAAAGGTAACTTGCGAATCAAGTTCAACATCAAGTTCCCGTCCAGGCTTACATCCGAGCAGAAAAACGGCATTAAGCGATTATTGACATCATATTCGTCTACATGA 1020 0.4549 MGVDYYKILDVDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAETKFKQISEAYDILSDPQKRAVYDQYGEEGLKGQVPPPGGGSDSSSANFRFNPRSADDIFSEFFGFSSSFGGMGDMGGRAGPSSFSRGGMFGDDIFAQFRSGAGEGSAHMPRKSAPIEITLLCSLEDLYKGTTKKMKISRDVIDANGRPTKVEEILTIEIKPGWKKGTKITFPAKGNEQRGHIPADLVFIIDEKPHSVFKRDGNDLVFTQKVSLVEALTGYTVQLTTLDGRNLTIPVNSIISPSYEEVIKGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKNGIKRLLTSYSST* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1887 339 CDD DnaJ_C 158 321 - -
Ahy14g1887 339 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Ahy14g1887 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 160 239 IPR008971 GO:0006457|GO:0051082
Ahy14g1887 339 CDD DnaJ 4 59 IPR001623 -
Ahy14g1887 339 Gene3D - 239 319 - -
Ahy14g1887 339 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Ahy14g1887 339 Pfam DnaJ C terminal domain 160 318 IPR002939 -
Ahy14g1887 339 MobiDBLite consensus disorder prediction 72 91 - -
Ahy14g1887 339 Gene3D - 159 237 - -
Ahy14g1887 339 SUPERFAMILY Chaperone J-domain 3 117 IPR036869 -
Ahy14g1887 339 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 335 - -
Ahy14g1887 339 SMART dnaj_3 3 62 IPR001623 -
Ahy14g1887 339 PRINTS DnaJ domain signature 62 81 IPR001623 -
Ahy14g1887 339 PRINTS DnaJ domain signature 24 39 IPR001623 -
Ahy14g1887 339 PRINTS DnaJ domain signature 6 24 IPR001623 -
Ahy14g1887 339 PRINTS DnaJ domain signature 42 62 IPR001623 -
Ahy14g1887 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 241 327 IPR008971 GO:0006457|GO:0051082
Ahy14g1887 339 Pfam DnaJ domain 4 67 IPR001623 -
Ahy14g1887 339 Gene3D DnaJ domain 3 119 IPR036869 -
Ahy14g1887 339 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1887 Ahy-Chr14 107439806 107443427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1887 5 69 C2H2 Transcription Factor Family AT1G74250 33.333 1.28e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1887 K09510 - nnu:104602593 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1887 14 107439806 107443427 Ahy14g1887 14 107439806 107443427 ECH
Ahy14g1887 14 107439806 107443427 Ahy4g1667 4 98761157 98764539 hybridization
Ahy14g1887 14 107439806 107443427 Ahy12g2035 12 104112927 104116722 PCT
Ahy14g1887 14 107439806 107443427 Ahy2g1763 2 89761988 89765696 PCT
Ahy12g2035 12 104112927 104116722 Ahy14g1887 14 107439806 107443427 PCT
Ahy2g1763 2 89761988 89765696 Ahy14g1887 14 107439806 107443427 PCT