Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1814 ATGGCATCTCCATTCAACATGCTTAAAGATCTTGACCTTGCTGCTGCTAATCAAGTTTGGCGTATCAAGATTTGTGTTATCAAGATATGGTCTATTATCATAGGTGAAGAGAAGTTTAGGAGGCCCAACTTGGAACTGGTTGTTATGGATGAATTAAAGTACAAGCCAACAACCCATGCTTTTCGTGTTTTCTTCAAGAGGGAAACTCAGTGTCGTTCATTAGGGGATATTAACTTCCCTAACAATATTTTTCACTTTGTCCCAAATGAAATGATACTTAGTCATGATAATCACCACTCTCACTTGATAGATGTCATTGGATTGTTAACCGGAAAGAGTGATATAATAGAGTTCACAAAAAATGGAAAGAAGTCTATATACATGGTGATTGAGCTTGATGATATGAAATCTAAGGGTAAAATAAGGTGTACTTTGTGGGAGGATTTTGCTAATAAACTGGTGAAACACATGGAGGAACAGCCTTCTACTGAATTTATAATCATCCTGCAGTTTGCCAAGTTTAACATGTTCAAGGGAACTATGGGCATATCTAATACAAACTATAACTCTACCCTATACATTAATGCTGACCTTCAAGAGGTTAAGGAATTTAGACAGAGATTTATTATGGGAAATGACAAGGCATCTAACCAGCTTTCTCAAATTGCATCTGATGTTTCAATGTCACTTGAGCAAGATCTTATTAGCCATACCCCATACAAGCCCATTTCTGAACTTAAGGACACCACTGAGGGTAGAATATTTGTTACTATTGGAACAGTCATGTCCATTGATACTAGATTCGGTTGGTGGTATAAGGGGTGTAAGATGTGCTTTCATTCACTCAAAGAGGATGAGAATTCATACTATTGCCAATCATGTGATATTTATCCTAATATTCATATTTCTCGTTACTGTATTCACCTCAGAGTATCTGATGAAATGGATTCTGCCTCATTTATTATTTATGATAAGGAAGCCTCCAAGTTTCTTGAAATTTCTGCTTCCGAGCTTCGATTGAAACAGATAGCAAAGGGTTACAACAAGGATGAATTTCCCTCTGAGATAAACTCATTTAGAGGTAAGAAGTTCCTATTCAAGGTTTCTGTCAAGTTCGATGATATCAATGCTTTCCAACCTTGTAAGATAACTGTTTTGAAGTTGACTGAAGATCCAACTATCCTGAATTTGTTTGCTGCCAAGTACAAGCTATCTGATCCGAACATCCCCATTGAAAACTCCGAGCTTCAAAGCTTGCATACATATTCTACTGATAATGCTAAGGAGATCAGTTCTCAGTCATGTGAAATTATTTCTCTTGACGTTAATGATGACTTTGTTACTCCCAAGAGAGGTATTATAGCTGGTGTAATGACAAAAAAATTGGTAGATGTTTTTCCAGAGACTGCCACTACTTCCACTTCCAAATGTAGAAAGCTCTCTCATGATTCTGACTGCAGCTCAATCAAAAAGCATGCTGACTAA 1485 0.369 MASPFNMLKDLDLAAANQVWRIKICVIKIWSIIIGEEKFRRPNLELVVMDELKYKPTTHAFRVFFKRETQCRSLGDINFPNNIFHFVPNEMILSHDNHHSHLIDVIGLLTGKSDIIEFTKNGKKSIYMVIELDDMKSKGKIRCTLWEDFANKLVKHMEEQPSTEFIIILQFAKFNMFKGTMGISNTNYNSTLYINADLQEVKEFRQRFIMGNDKASNQLSQIASDVSMSLEQDLISHTPYKPISELKDTTEGRIFVTIGTVMSIDTRFGWWYKGCKMCFHSLKEDENSYYCQSCDIYPNIHISRYCIHLRVSDEMDSASFIIYDKEASKFLEISASELRLKQIAKGYNKDEFPSEINSFRGKKFLFKVSVKFDDINAFQPCKITVLKLTEDPTILNLFAAKYKLSDPNIPIENSELQSLHTYSTDNAKEISSQSCEIISLDVNDDFVTPKRGIIAGVMTKKLVDVFPETATTSTSKCRKLSHDSDCSSIKKHAD* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1814 494 Gene3D - 230 394 IPR012340 -
Ahy14g1814 494 Gene3D - 77 219 IPR012340 -
Ahy14g1814 494 CDD RPA1_DBD_C 243 407 IPR013955 -
Ahy14g1814 494 Pfam Replication factor-A C terminal domain 255 389 IPR013955 -
Ahy14g1814 494 PANTHER BNAC07G49340D PROTEIN 47 453 - -
Ahy14g1814 494 CDD RPA1_DBD_B_like 104 209 - -
Ahy14g1814 494 PANTHER REPLICATION FACTOR A 1, RFA1 47 453 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy14g1814 494 SUPERFAMILY Nucleic acid-binding proteins 238 391 IPR012340 -
Ahy14g1814 494 SUPERFAMILY Nucleic acid-binding proteins 97 208 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1814 Ahy-Chr14 102974543 102977123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1814 80 385 Core DNA Replication Machinery Family AT5G08020 24.765 1.86e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1814 - - aip:107636694 960.288