Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1649 ATGTCAACATTGCAGATGTCCCATGTTATTGATTTAGAGCAAGGAAATCATGAAGATGATGCTGTTGTTGGAGGTGTTGGGAGTGATGATGATGATGGTAGCGTGTATTTATCTGATGCAGAAGAGGGCGGTTCAAGCCACTCTCATTTCTATTCAACACATGGTGATGGTGGCTCAGCATTTGATGATTGCAGCTTCTCATGTGTCTCTGATCTTGAAGCTGCTGCTGTTGTTCATGATTCTGGGAGGGCTTCTTTTGCTTCTGATTTCTCTGTGGAGCTGGGAAATGCAGCTGGGGTTCCTGAAATCAAAGTGCATTTGGATAATAATATTATTAATAATAATAATAATAATAATCACAAAGTGGAGAGGGATTGTAGAATTTGTCACATGGGTTTGGAGAGTGATAGTTCTGAGTCTGGTGTTCCAATTGAATTGGGTTGTGCTTGTAAAGATGATCTTGCTGCTGCTCACAAAATATGTGCTGAGACATGGTTCAAGATTAAGGGGAATTTGACCTGCGAAATTTGTCATTACGTTGCACGGAATGTTCATGGCACAACTGACCATTCTAGTGACGGGAACAACCCTGCTGCAATAGCTGCACTTTCAACACATGCGACTCCAGCAGAAGCTCGAAGATTTTGGCATGGTCATCGCTTCCTAAACTTTCTTCTTGCTTGTATGGTTTTCGCATTCGTTATATCATGGCTTTTCCATTTCAATGTGCCGTCATCATAG 741 0.417 MSTLQMSHVIDLEQGNHEDDAVVGGVGSDDDDGSVYLSDAEEGGSSHSHFYSTHGDGGSAFDDCSFSCVSDLEAAAVVHDSGRASFASDFSVELGNAAGVPEIKVHLDNNIINNNNNNNHKVERDCRICHMGLESDSSESGVPIELGCACKDDLAAAHKICAETWFKIKGNLTCEICHYVARNVHGTTDHSSDGNNPAAIAALSTHATPAEARRFWHGHRFLNFLLACMVFAFVISWLFHFNVPSS* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1649 246 CDD RING_CH-C4HC3_MARCH 126 178 - -
Ahy14g1649 246 Pfam RING-variant domain 126 177 IPR011016 GO:0008270
Ahy14g1649 246 SUPERFAMILY RING/U-box 122 181 - -
Ahy14g1649 246 PANTHER OS01G0850200 PROTEIN 5 245 - -
Ahy14g1649 246 SMART ringv_2 125 178 IPR011016 GO:0008270
Ahy14g1649 246 PANTHER ZINC FINGER, RING-CH-TYPE 5 245 - -
Ahy14g1649 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 189 IPR013083 -
Ahy14g1649 246 ProSiteProfiles Zinc finger RING-CH-type profile. 118 184 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1649 Ahy-Chr14 90142948 90146590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1649 77 246 C3H Transcription Factor Family AT5G05830 54.857 4.55e-59 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1649 14 90142948 90146590 Ahy17g1007 17 12743690 12747116 ECH
Ahy14g1649 14 90142948 90146590 Ahy14g1649 14 90142948 90146590 ECH