Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1603 ATGAACGGGAAAGCCTCAATCTCCAAGGAGCTTAATGCCAAGCATACCAAGATCTTAGAAGGACTTATGAAGCTACAAGAAAATAGGGAATGTGCAGACTGCCGGAACAAGGCACCACGATGGGCGAGTGTGAACCTAGGGATATTCATTTGCATGCAATGTTCCGGGATACACCGAGGTCTTGGAGTGCATATATCCAAGGTGCGATCTACAACCTTGGATACATGGTTGCCCGATCAGGTTTCTTTCATGCAATTTATGGGTAATGAGAAATCAAATAAGGATTGGGAGGCAAAGCTGCCCGCCAATTTCGACAGAAGCACAATGGGAATTGAGAAATTTATTTATTCCAAGTATGTGGAGAAAAAGTGGGCTTCAAAAGAAGGATTAATTAGTGGAGCTACAAATTATTTCCCGAAGAACATTAGTAGGAAACTTTCTTTAGAAGAAAGCATTCTTTCCAAACACGTGGCACAAGTTCTGCCTCCATTGACAAGAGCTCATGGTGGGGGTTCCTTAGTTGTGCAAAAGAAGAGTTCAGCTCCACCGTTAATTAAGAGGGCATCTTCATCAGTTGATTTTGATAAGTTCATAGGAAAGAGCAATGGCAGTGCTGACCTTTTTGCCTTGCTTTCTGTCCAAGAAGATAAACAAGGTTTCTCAAGTTGGGCAACATTTGATTGA 684 0.4225 MNGKASISKELNAKHTKILEGLMKLQENRECADCRNKAPRWASVNLGIFICMQCSGIHRGLGVHISKVRSTTLDTWLPDQVSFMQFMGNEKSNKDWEAKLPANFDRSTMGIEKFIYSKYVEKKWASKEGLISGATNYFPKNISRKLSLEESILSKHVAQVLPPLTRAHGGGSLVVQKKSSAPPLIKRASSSVDFDKFIGKSNGSADLFALLSVQEDKQGFSSWATFD* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1603 227 SUPERFAMILY ArfGap/RecO-like zinc finger 15 126 IPR037278 -
Ahy14g1603 227 SMART arf_gap_3 13 132 IPR001164 GO:0005096
Ahy14g1603 227 Pfam Putative GTPase activating protein for Arf 17 127 IPR001164 GO:0005096
Ahy14g1603 227 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD15-RELATED 1 227 - -
Ahy14g1603 227 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Ahy14g1603 227 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Ahy14g1603 227 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Ahy14g1603 227 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 132 IPR001164 GO:0005096
Ahy14g1603 227 CDD ArfGap 19 119 - -
Ahy14g1603 227 Gene3D Arf GTPase activating protein 2 130 IPR038508 -
Ahy14g1603 227 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 227 IPR044520 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1603 Ahy-Chr14 82749015 82766444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1603 19 147 C2H2 Transcription Factor Family AT4G21160 38.406 1.38e-23 95.1