Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1573 ATGTTGGTGGTGATAGAGCAGCAAGAGACAGAGGATCGAAACGCCAATCCCTCCAACGCGGTTGCGGGTAACGACGCTTCTGACGGTTTTGAAACGGCCAGCGACACCGACCTTGGCAGTGACAACGGAGGCGATGACGTCGGAGCTAGCAGCTATGATCAACGGCAGCAGCAACATCAACAGCAGCAGCTGAAGACAGAGCTTTCCGAGCTGGAGCCGGAGCCGGAGCCTGAGCAGAGTGTTTCTCCAAGTAATAGTTACTCTGGGGATCTCTTGATCAATGAGGAGTTGGAGAAGAAAGCATTGGTTCAAGCAAATGAAGCAAAGGCAGAAGGGAACAAGCTTTTTGTGGATGGGAAGTATGAGGAAGCATTATCCCAGTATGAACTTGCTCTACAAGTTGCACCTGACATGTCTTCATTGGTTGAAATACGCTCGATATGCCATGCAAACCGTGCTGTGTGCTTTCAGAAACTGGGAAAATATGACAACACAGTTAAAGAATGCACAAAAGCACTAGATCTGAATCCAGTGTACATTAAAGCTTTAGTAAGAAGAGGAGAAGCTCATGAAAAGCTTGAACATTTTGAAGAAGCCATTATTGATATGAAAAAGATCTTAGAAATTGATCCCTCAAATGATCAAGCTAGGAAGGCCATCAGGCGACTTGAGCCGCTTGCTGCAGAAAAGCGGGAAATCATGAAGGAAGAGATGATTGCAAAACTAAAAGAAATGGGAAATTCTGTCCTGGGCCGTTTTGGGATGAGTGTCGATAACTTCAAAGCAGTTAAAGATCCAAACACTGGTTCCTATTCTATCTCATTCCAGCGTTAA 834 0.4544 MLVVIEQQETEDRNANPSNAVAGNDASDGFETASDTDLGSDNGGDDVGASSYDQRQQQHQQQQLKTELSELEPEPEPEQSVSPSNSYSGDLLINEELEKKALVQANEAKAEGNKLFVDGKYEEALSQYELALQVAPDMSSLVEIRSICHANRAVCFQKLGKYDNTVKECTKALDLNPVYIKALVRRGEAHEKLEHFEEAIIDMKKILEIDPSNDQARKAIRRLEPLAAEKREIMKEEMIAKLKEMGNSVLGRFGMSVDNFKAVKDPNTGSYSISFQR* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1573 277 MobiDBLite consensus disorder prediction 1 88 - -
Ahy14g1573 277 ProSiteProfiles TPR repeat profile. 105 138 IPR019734 GO:0005515
Ahy14g1573 277 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Ahy14g1573 277 Pfam Tetratricopeptide repeat 150 177 IPR019734 GO:0005515
Ahy14g1573 277 MobiDBLite consensus disorder prediction 9 39 - -
Ahy14g1573 277 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 27 277 - -
Ahy14g1573 277 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 27 277 - -
Ahy14g1573 277 MobiDBLite consensus disorder prediction 47 68 - -
Ahy14g1573 277 Pfam Tetratricopeptide repeat 181 213 IPR013105 -
Ahy14g1573 277 Gene3D Tetratricopeptide repeat domain 65 244 IPR011990 GO:0005515
Ahy14g1573 277 SUPERFAMILY TPR-like 105 223 IPR011990 GO:0005515
Ahy14g1573 277 SMART tpr_5 180 213 IPR019734 GO:0005515
Ahy14g1573 277 SMART tpr_5 105 138 IPR019734 GO:0005515
Ahy14g1573 277 SMART tpr_5 146 179 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1573 Ahy-Chr14 77142803 77146989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1573 74 247 Calmodulin-binding Proteins AT3G25230 34.375 3.71e-16 76.3