Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1404 ATGGGGCACGTGAGAACTAAGACGGTGAAGAAATCTTCATGCCAAGTCATCGAGAGGTACTACTCTTGCATCACCCTTGAATTCCACACCACCAAGAAGGTTCTAGAAGAAGTCACACTCATCCCTTCCAAGAGGCTCCGCAACAAGATCGCAGGCTTCTCCACTCACTTCATGAAGCGAATCCAGAAGGGACCGGTCAGAGGCATCTCCCTCAAGCTTCAAGAAGAGGAGAGGGAGCATCGCATGGACTTCGTTCCTGATGTGTCTGCCATTGACATTCAGCATATCGAGGTTGATAAGGAAACTATCGACATGCTTCAATCTCTAGGTATGTCTGACATCCCTGGAATCACTCAGGTCAATCCTGCTCCTGTTCAGCAGATTCTGTTTGGCCACCCTGGCGCTGGATTCAGCGGTGCTCAGCAGAGTGATGCAGCAACAAAGTTAAAACAGAAAGAACAGGGTGAACTCACCAAATCGGGCTGTACGAAGGAAGCGGACGATGAAGGAGAAGCTGATGGTGAGGGAGAAGCTGACGACAAGGCTCGAAGCAAGAAGTCAACAACGAAGACCTGCTCACTGAGATCTGTTGACTCTTCTACCGACGACGAACAGTGTAGGGAAAGGAGAGATCAAGACCAGGTGCGAGACAAAGACCGTGAGAAGCAAGAAGACGATGACCACCACCATCTGATAAACCAGATGCGATTCCTTCTTCATCTGCCACCGGTGAAGCAAGCGCAGGGAAAGGAGAGCTTGAGCTGA 765 0.502 MGHVRTKTVKKSSCQVIERYYSCITLEFHTTKKVLEEVTLIPSKRLRNKIAGFSTHFMKRIQKGPVRGISLKLQEEEREHRMDFVPDVSAIDIQHIEVDKETIDMLQSLGMSDIPGITQVNPAPVQQILFGHPGAGFSGAQQSDAATKLKQKEQGELTKSGCTKEADDEGEADGEGEADDKARSKKSTTKTCSLRSVDSSTDDEQCRERRDQDQVRDKDREKQEDDDHHHLINQMRFLLHLPPVKQAQGKESLS* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1404 254 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Ahy14g1404 254 MobiDBLite consensus disorder prediction 200 234 - -
Ahy14g1404 254 MobiDBLite consensus disorder prediction 149 167 - -
Ahy14g1404 254 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Ahy14g1404 254 MobiDBLite consensus disorder prediction 131 254 - -
Ahy14g1404 254 PANTHER 40S RIBOSOMAL PROTEIN S17 1 134 IPR001210 GO:0003735|GO:0005840|GO:0006412
Ahy14g1404 254 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Ahy14g1404 254 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Ahy14g1404 254 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Ahy14g1404 254 PANTHER 40S RIBOSOMAL PROTEIN S17 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1404 Ahy-Chr14 38130545 38160732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1404 1 141 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 73.050 1.09e-67 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1404 K02962 - gmx:100527036 214.157