Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1293 ATGGAGAATATTGGTGATGAGTACCATCGTTATTGGGAGACCAGCATGTTCCTCCAAACCCAAGAACTCGACAACTGGGGTTTGGATGAGGCGTTGTCAGGCTACTACGATTCGAGCTCGCCGGACGGTGCCGCTTCGTCGGCGGCGTCGAAGAATATTGTGTCGGAGAGGAATAGAAGGAAGAAGCTCAATGAAAGGCTTTTTGCTCTTCGATCAGTGGTCCCCAACATCAGCAAGATGGATAAGGCTTCAATAATAAAGGATGCAATTGAGTACATACAAAAGTTGCAAGAACAAGAGAGGATAATTCAATCAGAGATAGTTGAGCTTGAGAGTGGTATGATGGTGGAGAAGAAGAATCCTAACAGCTATGAATTTGAGCATCAGGAGCTTCCAATGTTGTTGAGGTCCAAGAAGAAGAGAACAGATGAGCTTTATGATTCTCTCAATTCTAGAAACTCCCCTATTCATATATTAGAGCTGAGGGTAACATACATGGGAGAGAAGACAATAGTGATAAGCTTGACATGCAATAAAAGGACAGATACAATGGTGAAACTGTGTGAAATTTTTGAGTCATTGAAGCTGAAGATCATCACCGCCAATATCACTTCCCTTTCCTCTGCCAGGCTTTTGAAGACAGTCTTCATTGAGGCAGATGAAGAAGAAAAAGATCTTTTGCAGATAAAGATCCAAACAGCAATTGCAGCTCTTAATGACCCTCTAAGTCCAATGAGCATTTGA 744 0.4247 MENIGDEYHRYWETSMFLQTQELDNWGLDEALSGYYDSSSPDGAASSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIEYIQKLQEQERIIQSEIVELESGMMVEKKNPNSYEFEHQELPMLLRSKKKRTDELYDSLNSRNSPIHILELRVTYMGEKTIVISLTCNKRTDTMVKLCEIFESLKLKIITANITSLSSARLLKTVFIEADEEEKDLLQIKIQTAIAALNDPLSPMSI* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1293 247 Coils Coil 93 113 - -
Ahy14g1293 247 Pfam Helix-loop-helix DNA-binding domain 54 97 IPR011598 GO:0046983
Ahy14g1293 247 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 241 - -
Ahy14g1293 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 114 IPR036638 GO:0046983
Ahy14g1293 247 PANTHER TRANSCRIPTION FACTOR BHLH35 1 241 - -
Ahy14g1293 247 Gene3D - 44 112 IPR036638 GO:0046983
Ahy14g1293 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Ahy14g1293 247 SMART finulus 53 102 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1293 Ahy-Chr14 30386579 30397203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1293 1 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 60.090 1.74e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy14g1293 HLH 4.00E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1293 - - aip:107639158 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1293 14 30386579 30397203 Ahy4g1193 4 32663745 32674701 hybridization
Ahy11g3083 11 148467810 148471197 Ahy14g1293 14 30386579 30397203 PCT
Ahy1g1888 1 95475491 95479052 Ahy14g1293 14 30386579 30397203 PCT
Ahy14g1293 14 30386579 30397203 Ahy11g3083 11 148467810 148471197 PCT
Ahy14g1293 14 30386579 30397203 Ahy1g1888 1 95475491 95479052 PCT