Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1208 ATGTCAAGCACAGATGGTTCAGGCGCAGGGATTTATGCCAGTATCATCGTTGTTGTGATAATGGTGAAGATAGCTATTGTAGTTTGTGTATGCCGAGAAAGGATGAAGAATAATAATAAAGACGGATCAGTTCGTCCAGCCATACCGTTCTTGACAATCACAATTGATAAGTTCTTGAATGATATTGAAAGGGAGAAGCCAATTAGATTCACCGATCAGCAGCTACGCATTGCGACCGATAACTACTCAAATTTGTTGGGATCAGGAGGTTTCGGCACAGTTTACAAAGGAATCTTCAGCAACGGCACAATTGTGGCTGTGAAGGTGTTGTATGGAAGTTCTGACAAAAGAATTCAAGAACAGTTTATGGCAGAAATGGGAACACTTGGTAGGATCCACCATTTCAATCTTGTTCGGCTGTACGGATTTTGTTTCGAAAGGAACTTGATAGCGTTGGTTTATGAGTACATGGGAAATGGATCTCTTGACAGGTATTTGTTTAGAGAAATCAAGACTTTGGAATTTGAAAAGCTTCATGAGATTGCGGTTGGAACAGCAAGAGGCATCGCTTATTTACATGAAGAGTGCCAACACAGAATAATCCATTATGATATAAAACCAGGGAATATTCTCTTGGACAAGAATTTCAATCCAAAAGTCGCGGATTTCGGTTTGGCCAAGCTTTGTAACAGGGATAATACTCATATATCCATGACTGGAGGCAGGGGAACTCCCGGTTACGCTGCACCAGAACTTTGGATGCCATTTCCTGTCACTCACAAGTGCGATGTTTACAGCTTTGGCATGTTGTTATTCGAAATCATAGGCAGGAGAAGAAACGTAGACACGAATCTTTCAGAAAGTCAAGAATGGTTTCCAATCTGGGTTTGGAAGAAATACGATGGCGGAGAATTAGGAAATTCGAAAATAGTGGCGGAAATGGAGGAGAAACAAAAGGAAATGACAATGAGAATGGTCAGGGTGGCTCTATGGTGTGTCCAATATAGGCCAGAACTAAGGCCTAATATGAGTGTTGTGGTGAAAATGTTGGAAGGTTCAGATGAGATTCCAGAACCATTGAATCCATTTCAACACTTGATTGGAGGTACTTTTGTTGCTCATCCAGTGCAAGTTTCACAGGGCTATACTGAAAGCAGTAGCATCTATACTGGCTCTTCTATTATGGTAACTGACTCAAGCATTGTGTGTGCAACTCCTATTATGCACAAGTATGAGATTGAATTAGCCTCTAGCAGAGCTGATGACTCATGCAGGACACATTAA 1284 0.4128 MSSTDGSGAGIYASIIVVVIMVKIAIVVCVCRERMKNNNKDGSVRPAIPFLTITIDKFLNDIEREKPIRFTDQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTIVAVKVLYGSSDKRIQEQFMAEMGTLGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFREIKTLEFEKLHEIAVGTARGIAYLHEECQHRIIHYDIKPGNILLDKNFNPKVADFGLAKLCNRDNTHISMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNVDTNLSESQEWFPIWVWKKYDGGELGNSKIVAEMEEKQKEMTMRMVRVALWCVQYRPELRPNMSVVVKMLEGSDEIPEPLNPFQHLIGGTFVAHPVQVSQGYTESSSIYTGSSIMVTDSSIVCATPIMHKYEIELASSRADDSCRTH* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1208 427 SMART serkin_6 80 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy14g1208 427 PANTHER RUST RESISTANCE KINASE LR10-RELATED 8 417 IPR045874 GO:0004672
Ahy14g1208 427 CDD STKc_IRAK 86 352 - -
Ahy14g1208 427 ProSiteProfiles Protein kinase domain profile. 80 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy14g1208 427 PANTHER PUTATIVE-RELATED 8 417 - -
Ahy14g1208 427 Pfam Protein tyrosine and serine/threonine kinase 84 350 IPR001245 GO:0004672|GO:0006468
Ahy14g1208 427 SUPERFAMILY Protein kinase-like (PK-like) 65 351 IPR011009 -
Ahy14g1208 427 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Ahy14g1208 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Ahy14g1208 427 Gene3D Transferase(Phosphotransferase) domain 1 157 358 - -
Ahy14g1208 427 Gene3D Phosphorylase Kinase; domain 1 55 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1208 Ahy-Chr14 25221647 25223617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1208 69 363 Receptor kinase-like Gene Family AT5G38280 43.092 2.27e-77 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Ahy14g1208 PK_Tyr_Ser-Thr 5.80E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1208 - - gmx:100816921 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1208 14 25221647 25223617 Ahy4g1120 4 27393749 27395614 hybridization