Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1202 ATGATGTTCTGCCATACATTGTTCACTGAAAATGTTTGTATCCGTATCAAGGTGTTGACAGAAATTGATATATCAGCTGGTTTTCCCATGAAAATGTTTACTGCACACATAATAAGGTTGTGCTATATATTCTTCATTGGAAATTTTGGAATCAGTATCAAGGTACACTGTTTTGCTCCTATGATTAGTTGTCTTTATGCCATTGAATGGAGATGCATATGGACTCAGATTTCGTTTTCTCTCCATTTCCATCCTCAATTTGAATTAAAAAAGTGTGGAAAAATTCAAGCTACAGTTAAGAAACCACTCCTTAATAGGTTTAAGGATCTTATAGTTGAGGGTCAAGTTTATAGAATGGCATACTTTACTGTTGTGTCAAATCATGGTAGTTATAGAGCAACTTCTCATGAATTCAAATTGGTTTTCCTTCACCGAACCACTGTTGTAGCTGTTGATGAAGATGTTATCCCTAAGACTTGTTTCAACATGTTTCCTTTTTCTGAGCTGCTGAACATGACCGAAGATTATGATTTTTTAGTTGTTGGAGAAGAGAAAGAATATGCAAAAGAGGGGAAAATTGTGAAAATGATTGTGCTTCTTACGTTGCGATGTGAATTGTTTGGGGACTATGTTAATCAAGTAAATCATTTCCTTGCCTCCGGTTATGTGGGGCAGCCTGTTGTAGTCATTCAACTTGCAAAAGTCAAGTTCTTTAGGGGTCAAGTAGGCCTTCAAAATGTGATGTATGCCACTCAAATGTTATTTAATCCTGATCTTCCTGAAGTTGTTGAGTTCAGGCAGAGTATGATTGAGCAAGGTGTGAATGGTACCCAGCCACTGTTTATTGCAAATGAGGGTAAAGTTGTGTCCTTGGAAGATGATTTCATGCGTTTAACTAGAAAATGCACCATTGAAGAGCTTCAAGATAACAATCAGTTGAAGATCATAGTGGGGGAGGGTATTTTCCTTTTCTTTGATCGTGAGGCATCTTATTTGCTTAAGAAATCATGTGCTGACTTGTTTACTGAGGTTCAAAGAGATGCCAGTCTTACATGTGGGGATACTTATCCTCCCATTTTCCAAGGGCTCATTGGAAAGAAGTTACTGCTGAAGGTTGATATCAAAGGTGTCCTACATGATACATTTTATGGCACTTTCTGA 1161 0.3738 MMFCHTLFTENVCIRIKVLTEIDISAGFPMKMFTAHIIRLCYIFFIGNFGISIKVHCFAPMISCLYAIEWRCIWTQISFSLHFHPQFELKKCGKIQATVKKPLLNRFKDLIVEGQVYRMAYFTVVSNHGSYRATSHEFKLVFLHRTTVVAVDEDVIPKTCFNMFPFSELLNMTEDYDFLVVGEEKEYAKEGKIVKMIVLLTLRCELFGDYVNQVNHFLASGYVGQPVVVIQLAKVKFFRGQVGLQNVMYATQMLFNPDLPEVVEFRQSMIEQGVNGTQPLFIANEGKVVSLEDDFMRLTRKCTIEELQDNNQLKIIVGEGIFLFFDREASYLLKKSCADLFTEVQRDASLTCGDTYPPIFQGLIGKKLLLKVDIKGVLHDTFYGTF* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1202 386 PANTHER REPLICATION FACTOR A 1, RFA1 112 314 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy14g1202 386 CDD RPA1_DBD_A_like 73 148 - -
Ahy14g1202 386 CDD RPA1_DBD_B_like 181 270 - -
Ahy14g1202 386 Pfam Domain of unknown function DUF223 94 173 IPR003871 -
Ahy14g1202 386 Gene3D - 155 278 IPR012340 -
Ahy14g1202 386 Gene3D - 300 382 IPR012340 -
Ahy14g1202 386 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 112 314 - -
Ahy14g1202 386 SUPERFAMILY Nucleic acid-binding proteins 93 153 IPR012340 -
Ahy14g1202 386 SUPERFAMILY Nucleic acid-binding proteins 161 269 IPR012340 -
Ahy14g1202 386 Gene3D - 84 153 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1202 Ahy-Chr14 25029643 25032944 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1202 93 266 Core DNA Replication Machinery Family AT2G06510 26.531 1.44e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1202 - - adu:107471135 437.187