Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1148 ATGAGCCCTACCATAAGCAAACCATGTTACCCTCCACAAAATTCAGGTGGCTTCAACTTAATGGTTATTTTGGCGGCCGTTCTATGCGCCTTCCTTTGCGCGCTAGGCCTCCTCAACACCATGCTACAATGCGCGAGTCGCGTCCTCACGGAGCCTTTACAATGGATTGCTACCAGAGGGATCAACTCAGGGCTCAAGAAGAAAGAAATGGTATCTTTGCCAACCTCAATTTATAATAGTAACAGCCATAATAATAATAATAACAATAGTAATAGTAGTAGTACTAGTAGTAATTCAGGGTCATCACCATCTTCAGGTTCTCCTAGTTGTGCAATTTGCCTAGCTGATTTCTCTGATGGAGACAAGATAAGATTTCTTCCAAAGTGTAATCATCGTTTTCATGTGGCTTGCATTGATAAGTGGCTTCTTTCCCATTCCTCTTGCCCAACATGTAGGAACTTCCTCAAGTCCAATGATTCATCACACCCTTTTCATATTCTCATAGCTTAA 510 0.4196 MSPTISKPCYPPQNSGGFNLMVILAAVLCAFLCALGLLNTMLQCASRVLTEPLQWIATRGINSGLKKKEMVSLPTSIYNSNSHNNNNNNSNSSSTSSNSGSSPSSGSPSCAICLADFSDGDKIRFLPKCNHRFHVACIDKWLLSHSSCPTCRNFLKSNDSSHPFHILIA* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1148 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 157 IPR013083 -
Ahy14g1148 169 MobiDBLite consensus disorder prediction 81 104 - -
Ahy14g1148 169 Pfam Ring finger domain 109 152 IPR001841 -
Ahy14g1148 169 PANTHER OS06G0666500 PROTEIN 12 157 - -
Ahy14g1148 169 SUPERFAMILY RING/U-box 109 160 - -
Ahy14g1148 169 SMART ring_2 110 151 IPR001841 -
Ahy14g1148 169 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 12 157 - -
Ahy14g1148 169 ProSiteProfiles Zinc finger RING-type profile. 110 152 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1148 Ahy-Chr14 21979166 21979851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1148 11 155 C3H Transcription Factor Family AT2G17450 41.772 1.55e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1148 - K19040 ahf:112794746 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1148 14 21979166 21979851 Ahy4g1051 4 21824611 21825162 hybridization