Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1086 ATGCACTTAATCTTATATATAATGGGATTCGATCTCACCTCGATTCTCATTCTATTATATACTCAAAAAATTAAACCTTCATCAAAAGAGAAGAGTGTCTTATTGAATTATTCTTTGAAATTATTAGAAAGAAAAATGGTTGATAACATTGGAGGTAGTGGTTCTTCTAATAATGAAGGCATCATCAAGGAGCAAGATCGGTTGCTGCCAATAGCCAATGTTGGTAGGATCATGAAGCAGATTCTTCCTCAGAATGCGAAAATCTCGAAGGAGGCGAAGGAGACGATGCAGGAGTGCGTGTCGGAGTACATTAGCTTCGTGACGAGCGAGGCGTCGGAGAAATGCCGGAAGGAGAGGAGGAAGACTGTTAATGGTGATGACATTTGTTGGGCGCTCGCAACGCTCGGTTTTGATGACTATGCCGAAGGGATGAGAAGGTATTTACATAGGTATAGAGAGTTAGAGGTTGATAATAATAATAATAATAATAATAATAATAATAATCAAGAGAGAGGGAAATAA 522 0.3851 MHLILYIMGFDLTSILILLYTQKIKPSSKEKSVLLNYSLKLLERKMVDNIGGSGSSNNEGIIKEQDRLLPIANVGRIMKQILPQNAKISKEAKETMQECVSEYISFVTSEASEKCRKERRKTVNGDDICWALATLGFDDYAEGMRRYLHRYRELEVDNNNNNNNNNNNQERGK* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1086 173 Gene3D Histone, subunit A 57 173 IPR009072 GO:0046982
Ahy14g1086 173 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 46 170 IPR027113 GO:0001228|GO:0006355|GO:0016602
Ahy14g1086 173 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 68 132 IPR003958 -
Ahy14g1086 173 ProSitePatterns NF-YB/HAP3 subunit signature. 99 115 IPR003956 GO:0005634|GO:0006355|GO:0043565
Ahy14g1086 173 SUPERFAMILY Histone-fold 65 167 IPR009072 GO:0046982
Ahy14g1086 173 Coils Coil 151 171 - -
Ahy14g1086 173 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Ahy14g1086 173 PRINTS CCAAT-binding transcription factor subunit A signature 115 133 - -
Ahy14g1086 173 PRINTS CCAAT-binding transcription factor subunit A signature 134 152 - -
Ahy14g1086 173 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y PROTEIN 46 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1086 Ahy-Chr14 19525147 19526147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1086 61 162 CCAAT-HAP3 Transcription Factor Family AT2G47810 76.471 4.94e-57 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Ahy14g1086 CBFD_NFYB_HMF 5.00E-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1086 K08065 - gmx:100794513 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1086 14 19525147 19526147 Ahy14g1086 14 19525147 19526147 ECH
Ahy14g1086 14 19525147 19526147 Ahy4g0991 4 19573317 19574159 hybridization
Ahy11g2541 11 141277020 141277454 Ahy14g1086 14 19525147 19526147 PCT
Ahy1g2385 1 101917368 101917975 Ahy14g1086 14 19525147 19526147 PCT
Ahy14g1086 14 19525147 19526147 Ahy11g2541 11 141277020 141277454 PCT
Ahy14g1086 14 19525147 19526147 Ahy1g2385 1 101917368 101917975 PCT