Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1081 ATGTTATCACTCCATTCATCAACAAACATGTTTAACTTACACCGTCAGAAACCCCTTATCTATGTAAACCTAAAAGTTCTATTCCGAAGAACACCACCACACATGTTCTGCACTTCACAATCACACTCTTTGACGGTTTCATACCTCATCAATAACCTTGGCTTCACCCCACAATCCGCTCTAAACACCTCAAAACGGTATAGTTTCAAGACCCCACACAAGGCAGACTTAGTCATCGCATTCTTCAAGACCCATGGATTCTCCCATTCCCATATCGCTGCCATTGTTGCCAAGCTACCTAAGATACTTTCGTCCAATCCACAAATGATCATGCCAAAGTTTCAATTTCTGGCCTCCAAAGGTGCTTCCACCGATGACATTATTCTGCTAGCCACTAGGAACCCTAAATTCTTGCAATCGAGCCTCAAGAACAACATAATCCCTACTTATGGAATGCTGAGAACATACTTTCAATCCGATGAGAAAATGCTCCGTTGCATTGCTTCTTTCCCTGTTTCGTTTATGGAGGCTCGTTTGGTGAACAGTGTCAAGATGTTGGCTGATGCAGGAGTCTCTGACTCTGCTATCGGCTATTTGTTGCGTACCAGGGTTTCGGTGCTCTTGTCTGCTAACTTTAGGGAGCAGGTGGACGAAATAAAGGAATTAGGGATTGATCCTTCAACTGTTAAGTTCGCCATAGCTTTGCGTGCCAAAAAGACTGTACCGAAATCACTGTGGGATGCGAAAGTCGATGTCTTGAAGAGCTGGGGTTGGTCTAAAGAAACAATGTCCGAAGCATTCAGGAGGAACCCTTTATGTATGCTATCATCTAAGGATAAGATTAATGAGGTGATGAAACTTTGGGTCAATCAATTAGGTTGGGACCCTTTGGCTCTTGCCAAGTTTCCATGGCTTTTTGGATATAGTTTGGAGAGAAAGCTTATTCCAAGGGCTTTTGTTCTCCAGTATTTACTTTCAAGAGGTCTGAGAAACAAGAATGATGAATTAAGTAACCCATTTTTTATTTCTGAAGAGTTGTTCGTTAAAAGGACAGATAGGCTGACACACAATTTTGGTGCATCGCCTGAAATACAAGTAGGTGGGAGTAAAAATTAG 1116 0.422 MLSLHSSTNMFNLHRQKPLIYVNLKVLFRRTPPHMFCTSQSHSLTVSYLINNLGFTPQSALNTSKRYSFKTPHKADLVIAFFKTHGFSHSHIAAIVAKLPKILSSNPQMIMPKFQFLASKGASTDDIILLATRNPKFLQSSLKNNIIPTYGMLRTYFQSDEKMLRCIASFPVSFMEARLVNSVKMLADAGVSDSAIGYLLRTRVSVLLSANFREQVDEIKELGIDPSTVKFAIALRAKKTVPKSLWDAKVDVLKSWGWSKETMSEAFRRNPLCMLSSKDKINEVMKLWVNQLGWDPLALAKFPWLFGYSLERKLIPRAFVLQYLLSRGLRNKNDELSNPFFISEELFVKRTDRLTHNFGASPEIQVGGSKN* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1081 371 Gene3D Transcription termination factor 3, mitochondrial 176 357 IPR038538 -
Ahy14g1081 371 Gene3D Transcription termination factor 3, mitochondrial 58 175 IPR038538 -
Ahy14g1081 371 SMART mt_12 128 160 IPR003690 GO:0003690|GO:0006355
Ahy14g1081 371 SMART mt_12 93 123 IPR003690 GO:0003690|GO:0006355
Ahy14g1081 371 SMART mt_12 264 295 IPR003690 GO:0003690|GO:0006355
Ahy14g1081 371 SMART mt_12 296 330 IPR003690 GO:0003690|GO:0006355
Ahy14g1081 371 PANTHER CGI-12 PROTEIN-RELATED 34 350 IPR003690 GO:0003690|GO:0006355
Ahy14g1081 371 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 34 350 - -
Ahy14g1081 371 Pfam mTERF 248 338 IPR003690 GO:0003690|GO:0006355
Ahy14g1081 371 Pfam mTERF 80 230 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1081 Ahy-Chr14 19306608 19313837 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy14g1081 mTERF 1.10E-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1081 K15032 - gmx:102666739 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy1g2383 1 101904869 101906014 Ahy14g1081 14 19306608 19313837 PCT
Ahy14g1081 14 19306608 19313837 Ahy1g2383 1 101904869 101906014 PCT