Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1024 ATGGAAAAGAAGGGAAAAATCATAGTATCAGTAGTTGTTTCACTTTCGCTCATCCTTGTGGCGGGAGTTGCCACCGGGATCATCGTGGCCGTTAATAACAAGAAAAGCAATGGCGCTGATGAAGTGCAAAACACTAAAGAAAGGTTCACGAGTCTCATTTGCCGTAACACACAAGAGAATCAAAACCTCTGTCGCGAGGTTCTAAGCCAAGTTGATGGTTCCTCTTCTTCCGACCTGAAAGCATACATCGATGCCGCTGTGAACGATATCAGAGATGGCGTCACCACCGCCCTAAAGATGATGATGACTGAGGAGGAGTTCTCCAAAGATGACAATGGAATCAAGATGGCCATTGATGGTTGCAAAGAAGTTATGGAGTCCGCATTGAGCAGCCTCGACCTTTTCAGCAATGTGCTTCGCAGCAATCACGACATTAACTCCCTGCAACCGCAAATCCCCGACCTCAAGAACTGGCTTAGCGCCGTTATCTCATATCAGCAATCTTGTATTAACATTTTTGAGGATCAAAATAAAGGAGAGAGAAAAATCAAAGAACAACTACAAAGCCTGAGTTTGGATCGTGTTGAGAAGGTTTCCATCATAACTCTTGATATTGTTACTGGTTTGGCTAAGATCATTGAAGATCTTGGCCTGCATGTGGAAATGAAACCCATTGCTTCTTCTGGGCGTGTTCTTCGCGAAGAGGTTGATAACGAGGGGTTCCCCGATTGGTTTTCCTCTTCAGATCGTAAGCTGTTGGCGAAGGATGTGAAGTTTCATGTTCCAAATGTAGTGGTTGCTAAAGATGGTAGTGGAAATTTTAGGACGGTTCAGGATGCAATTAACTCGTACCCAAAGGCAAAGAGTTTTCAGGAAAGGTACATTATCTATGTTAAGGCGGGGATTTATAAGGAGAATTGTACAGTTCCATCTTATGCAATGAACATTTTCATGTATGGTGATGGCCCTACTAAGACCATTATCACTGCTAGTATGAGCAATGTCACCCATAACCTCAAGGCCATGTTTACTGCCACTTTCGTGAATAAAGCGGGAATGTTTCTTGCGAAGGACATGAGGTTCGAGAATGCAGCTGCCAATAGACAATTCTATCGCAACTGCGAAATTACTGGAACAGTTGACTTTATCTTCGGTACATCTCCTGCCGTGATCCAGAGAAGCAAGCTCATCGTGAGGATGCCCTTGCCAACTCAGTTCATTGTGTTGGTCGCAGATGACACCGTCGAGAGGAACATGACTACTGGCATTGTGATTCAGGAATGCCAGATTGTTCCCGATTCAATGTTTGACTCGGTCAAATACCAAATCAAGACTTATTTGGGTAGGCCATGGAAGGAAGGATCGAGAGCAGTAATTATGGAATCATATCTGAGTGATTGGATTAATCCGGAAGGGTGGGCCCCTCATGCTGGCAATGAGATAAAAGGCTTCTTAGATATTTGTGAGTATGGAAATACCGGACCAGCTGCTTCAGTTTATGGAAGAATCAAGTGGAAGGGATATCGTGGTATAATAACTAAGAATGAAGCCATGCGATTCACTGTTGCTGAATTCCTCAAGGGTGGACCTAACAATAATGCTGACCAATGGTTGAACGCTCTTGGTGTTCCTTTTGAAAGTGGTTTTGTACCCACCCACTTTGTTCTTCGACATCCGAGTTATTCTCACTCCATTAAAGAAAAGGCGTATTACAACAGTGCAAGAGATGAACTATACCTTAGAAGTTCATTCACACAAGAACAGAAGTTCAAGAGGAAATCTAGGAAGAGCCAGATGTGGTGCTGCATTGCCGGATTCGTCAGTCATATTGGTTTCGCTGGCAGCGTCGTAGTGGAACTAGTAGCTATTCTCCATGATTTGGGGTTGGCATGGCAGTTTGGATACAGAAAGGTGGTTTGTGAAAGTGATTTCATGGTGTCTCTGGAGATTATTCATGACAATGCCGAAGACTTTCCAAAATTAGCAGACATTGTGGAAGAAATTCATTAG 2010 0.4358 MEKKGKIIVSVVVSLSLILVAGVATGIIVAVNNKKSNGADEVQNTKERFTSLICRNTQENQNLCREVLSQVDGSSSSDLKAYIDAAVNDIRDGVTTALKMMMTEEEFSKDDNGIKMAIDGCKEVMESALSSLDLFSNVLRSNHDINSLQPQIPDLKNWLSAVISYQQSCINIFEDQNKGERKIKEQLQSLSLDRVEKVSIITLDIVTGLAKIIEDLGLHVEMKPIASSGRVLREEVDNEGFPDWFSSSDRKLLAKDVKFHVPNVVVAKDGSGNFRTVQDAINSYPKAKSFQERYIIYVKAGIYKENCTVPSYAMNIFMYGDGPTKTIITASMSNVTHNLKAMFTATFVNKAGMFLAKDMRFENAAANRQFYRNCEITGTVDFIFGTSPAVIQRSKLIVRMPLPTQFIVLVADDTVERNMTTGIVIQECQIVPDSMFDSVKYQIKTYLGRPWKEGSRAVIMESYLSDWINPEGWAPHAGNEIKGFLDICEYGNTGPAASVYGRIKWKGYRGIITKNEAMRFTVAEFLKGGPNNNADQWLNALGVPFESGFVPTHFVLRHPSYSHSIKEKAYYNSARDELYLRSSFTQEQKFKRKSRKSQMWCCIAGFVSHIGFAGSVVVELVAILHDLGLAWQFGYRKVVCESDFMVSLEIIHDNAEDFPKLADIVEEIH* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1024 669 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 199 IPR035513 -
Ahy14g1024 669 ProSitePatterns Pectinesterase signature 2. 376 385 IPR033131 -
Ahy14g1024 669 SMART PMEI_2 45 205 IPR006501 GO:0004857
Ahy14g1024 669 PANTHER PECTINESTERASE 12 365 - -
Ahy14g1024 669 Pfam Plant invertase/pectin methylesterase inhibitor 52 204 IPR006501 GO:0004857
Ahy14g1024 669 PANTHER PECTINESTERASE 12 365 - -
Ahy14g1024 669 CDD RNase_H_like 600 669 IPR044730 -
Ahy14g1024 669 TIGRFAM PME_inhib: pectinesterase inhibitor domain 39 205 IPR006501 GO:0004857
Ahy14g1024 669 CDD PMEI-like_3 52 211 - -
Ahy14g1024 669 Gene3D - 260 365 IPR012334 -
Ahy14g1024 669 PANTHER PECTINESTERASE 365 549 - -
Ahy14g1024 669 Gene3D - 366 549 IPR012334 -
Ahy14g1024 669 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 210 IPR035513 -
Ahy14g1024 669 PANTHER PECTINESTERASE 365 549 - -
Ahy14g1024 669 SUPERFAMILY Pectin lyase-like 263 546 IPR011050 -
Ahy14g1024 669 Pfam Pectinesterase 365 528 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1024 Ahy-Chr14 17719698 17728842 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1024 54 549 Carbohydrate Esterase AT4G33230 33.084 5.31e-84 275