Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1017 ATGGCGGCGAAAATGCAGTCGCGAAAGGTTCACGAGTCTCATGTGTCGCAACACACAAACCTCTGTCGCGAGGTTCTAAGCCAAGTTGATGGTTCCTCTTCTTCCGACCCAAAAGCATACATCGACACCGCCGTGAACGATATTAGAGACGGCGTCACCACCGCCCTAAAGATGATGACGACTGAGGAGGAGTTCTCTAAAGATGACAACGGAATCAAGATGGCCATTGATGGTTGCAAAGAAGTCATGGAGTCCGCATTGAGCAGCCTCGACCTTTTCAGCAATGTGCTTCACAGAAATCACGACATTAACTCTGTACAAATGCAAAGCCCCGACCTCAAGAACTGGCTTAGCGCCATTATCTCATATCAGCAATCTTGTGTTGACATTTTTGAAGATCAAAATGAAGGAGAGAGAAAAATCAAAGAACAACTACAAAGCCAGAGTTTGGATCGTGTTGAGAAGGTTTCCATCATAACTCTCGATATTGTTACTGGTTTGGCTAAGATCATTGAAGATCTTGGTCTGCATGTGCAAATGAAACCCATTGCTTCTTCTAGGCATGTTCTTCGCGAAGAGGTTGATAACGAGGGGTTCCCCGATTGGTTTTCCTCTTCAGATCGCAAGCTGTTGGCGAATGATGTGAAGTTTCATGTTCCAAATGTAGTGGTTGCTAAAGATAGTAGTGGGAACTCTAGGACGATTCAGGATGCAATTAACTCGTATCCAAAGGCAAAGAATTTTCAGGGAAGGTACATTATCTATGTTAAGGTGGGGATCTATAAAGAGAATTGTACGGTTCCATCTCATGCAATAAACGTTTTCATGTATGGCGATGGCCCTACTAAGACCATTATCACTGCTAGTATGAGCAATGTCACCCACAACCTCAAGACCATGTTAACTGCCACTTTCGTGAATAAAGCGGGAATGTTTCTTGCGAAGGACATGAGGTTTGAGAATGCAGCTGGTGCAAAAGGGCACCAAGCAGTTGCACTAAGAAATGTGGGAGATTTTTCAGCTTTCTATAACTGTCACATACACGGTTATCAAGACACCTTGTATGTTCAAGCTAACAGGCAATTCTACCGCAACTGCGAAATCGCTGGAACAGTTGACTTTATCTTTGGTACATCTCCCGCCGTGATTCAGAGAAGCAAGCTCATCGTGAGGAAGCCCTTGCCAACTCAGTTCAATGTGTTGGTCGCAGATGGCACCGTCGAGAGGAACATGACTACTGGCATTGTGATTCAGGAATGCCAGATTGTTCCAGATCCAATGTTTGACTCTGTCAAGTACCAAATCAAGACTTATTTGGGTAGGCCATGGAAGGAAGGATCGAGAGCAGTAATCATGGAATCATATCTGGGTGACTGGATTAATCCGGAAGGGTGGGCCCCTCATGATGGCAATGAGATGAAAGGCTTCTTAGATATTTGTGAGTATGGAAACACCGGACCTGCTACTTCAGTTCATGGAAGAATCAAGTGGAAGGGGTATCGTGGTATGATAACTAAGAATGAAGCCATGCGATTCACTGTTGCTGAATTCCTCAAGGGTGGACCTAACAATGGTGCTGACAGATGGTTGAACGCTCTTGGTGTTCCTTTTGACAGTGGTTTTCTAAGACCATAA 1635 0.4465 MAAKMQSRKVHESHVSQHTNLCREVLSQVDGSSSSDPKAYIDTAVNDIRDGVTTALKMMTTEEEFSKDDNGIKMAIDGCKEVMESALSSLDLFSNVLHRNHDINSVQMQSPDLKNWLSAIISYQQSCVDIFEDQNEGERKIKEQLQSQSLDRVEKVSIITLDIVTGLAKIIEDLGLHVQMKPIASSRHVLREEVDNEGFPDWFSSSDRKLLANDVKFHVPNVVVAKDSSGNSRTIQDAINSYPKAKNFQGRYIIYVKVGIYKENCTVPSHAINVFMYGDGPTKTIITASMSNVTHNLKTMLTATFVNKAGMFLAKDMRFENAAGAKGHQAVALRNVGDFSAFYNCHIHGYQDTLYVQANRQFYRNCEIAGTVDFIFGTSPAVIQRSKLIVRKPLPTQFNVLVADGTVERNMTTGIVIQECQIVPDPMFDSVKYQIKTYLGRPWKEGSRAVIMESYLGDWINPEGWAPHDGNEMKGFLDICEYGNTGPATSVHGRIKWKGYRGMITKNEAMRFTVAEFLKGGPNNGADRWLNALGVPFDSGFLRP* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1017 544 Gene3D Invertase/pectin methylesterase inhibitor family protein 13 168 IPR035513 -
Ahy14g1017 544 Coils Coil 128 148 - -
Ahy14g1017 544 Gene3D - 217 541 IPR012334 -
Ahy14g1017 544 PANTHER PECTINESTERASE 16 541 - -
Ahy14g1017 544 SMART PMEI_2 10 163 IPR006501 GO:0004857
Ahy14g1017 544 ProSitePatterns Pectinesterase signature 2. 368 377 IPR033131 -
Ahy14g1017 544 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 16 158 IPR035513 -
Ahy14g1017 544 Pfam Pectinesterase 221 520 IPR000070 GO:0030599|GO:0042545
Ahy14g1017 544 Pfam Plant invertase/pectin methylesterase inhibitor 17 162 IPR006501 GO:0004857
Ahy14g1017 544 PANTHER PECTINESTERASE 16 541 - -
Ahy14g1017 544 CDD PMEI-like_3 15 169 - -
Ahy14g1017 544 SUPERFAMILY Pectin lyase-like 221 538 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1017 Ahy-Chr14 17389946 17394509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1017 35 541 Carbohydrate Esterase AT4G33230 38.310 5.47e-111 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1017 K01051 - gmx:100815015 572.007