Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1008 ATGGGGTGTTTGTGTCGCAACTTTGACTGGAATGTAGCAGCAGCCATGGTTCTTTTTCCATCTCTTCTCAATGGATTTGCAAGAAAGAAAAGTTGTCCAAACGATGATGACAATGATGAAAGGAAAGCCGTGAAAGCACTCGCGAAGGAAGCAAGGAAGAATGGCTTGTTATTGAGTTCATCAGGAACTGTTAAGTCTTCCAAAGCCAACAACTTTGCCTCAATTTTCACAAAGAAGGGCCAGAAAGGAGTCAATCAAGATCGCCTTATTGTTTGGGAGGAATTTGGTTGGCAAGAAGACATGATATTGTGTGGAGTTTTTGATGGACATGGCCCTTGGGGACACTATGTGTCCAAAAGTGTCATGAAACTTGTCCCTGCCTCTTTGCTATGCAATTTGAAGGAAAATCTTGCTGCAACATCTCTTGACCTGAATTACAAGATGGAAGCAGATAGGAGGAACCACCATGAATTTGACATATGGAAGCAAGCATGCATAAAGACTTGTGCTGCTGTTGATCATCATCTAAAGCAGAATACTGGGATTGATTCCTTTCAAAGTGGTACTACAGCTTTGACAGTTATCAAACAGGGTGAAGATCTGATTATATCAAACTTAGGAGATTCAAGGGCAGTATTGGCAACAACTTCAGATGGTGGCACACTAAGTGCCCTTCAGCTTACAACTGACATGAAGCCAAATTTACCAAAGGAGGCAGAGAGGATAATGGAATCAAGAGGGAGGGTGTTTTGTCTAGAAGATGAGCCAGGAGTGTATAGGGTGTGGATGCCAAATGGTAAAACACCAGGACTTGCAATATCAAGAGCGTTGGGTGATTATTGTGTCAAGGATTTTGGACTAATCTCTGTGCCTGAAGTCACTCAAAGGAAGCTAAACTCTAGAGATCAATTTCTCATCTTGGCTAGTGATGGGGTATGGGATGTAATTTCGAACCAAGAAGCAGTGAAGATAGTTGGTTCAAGTGAAGAGAAAGGAAAAGCTGCCGAGAGATTGGTGAAATGCGCTAAGCATGAATGGAAGAGGAAGCGAAGAGGCATTGCCATTGATGACATCTCAGCTATCTGCCTCTTCTTTCAGCCCCATAATAACTTTCTCACACCACCATCATATAATGTATAG 1140 0.4237 MGCLCRNFDWNVAAAMVLFPSLLNGFARKKSCPNDDDNDERKAVKALAKEARKNGLLLSSSGTVKSSKANNFASIFTKKGQKGVNQDRLIVWEEFGWQEDMILCGVFDGHGPWGHYVSKSVMKLVPASLLCNLKENLAATSLDLNYKMEADRRNHHEFDIWKQACIKTCAAVDHHLKQNTGIDSFQSGTTALTVIKQGEDLIISNLGDSRAVLATTSDGGTLSALQLTTDMKPNLPKEAERIMESRGRVFCLEDEPGVYRVWMPNGKTPGLAISRALGDYCVKDFGLISVPEVTQRKLNSRDQFLILASDGVWDVISNQEAVKIVGSSEEKGKAAERLVKCAKHEWKRKRRGIAIDDISAICLFFQPHNNFLTPPSYNV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1008 379 Pfam Protein phosphatase 2C 153 342 IPR001932 -
Ahy14g1008 379 CDD PP2Cc 71 365 IPR001932 -
Ahy14g1008 379 SUPERFAMILY PP2C-like 66 367 IPR036457 -
Ahy14g1008 379 SMART PP2C_4 63 363 IPR001932 -
Ahy14g1008 379 ProSiteProfiles PPM-type phosphatase domain profile. 72 365 IPR001932 -
Ahy14g1008 379 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 16 369 - -
Ahy14g1008 379 PANTHER ALPHABET, ISOFORM E-RELATED 16 369 - -
Ahy14g1008 379 Gene3D - 59 367 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1008 Ahy-Chr14 17092472 17095725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1008 16 366 PP2C-type Phosphatase Gene Family AT3G05640 57.865 6.07e-150 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1008 - - aip:107636155 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1008 14 17092472 17095725 Ahy14g1008 14 17092472 17095725 ECH