Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g0972 ATGGCCATGGCCTTGCATGACCATGTCTTCTTCTACATCTTTGTCATCATCTCCGCCGCGCCATTATCGCTCTCTCAGCCACAAGCCGCCTCCTCCTGCAACGGAATATTCCTTTCTTACACTTACACCAGCGGCTACCGCCTGCCGCCGAACACGTCCGACACCGCGGACCAGCCATACCGGTTCACGTCGGAGCTGACGGTGCTAAACAACGGCCTAGAGGATCTGAAGTCATGGAAGGTGTTCGTGGGTTTCCGGCACCGAGAGTGGCTGGTTTCGGCGTCGAACGCGGAGCTGGCAGACGGCACAGGGCTCCCTGCTGCCGTCGGAAACGGGACAGTTTTGGAGGGGTCCGAGGTGAGGGACTTGAAGACGGCAGCGGAGACGGCGGGGGACTTAAAACAGATGATGGTAACGGTGGACATGGTGGGGACGGTGTTTGGGGTGGCGCCACCCAATGTTCCCATGCCTTCCACCATTAGGCTCTCTAATGAAGGTTTTATTTGTCGTAAACCCACTTCTCAAGCAGGTAACAATGAGACACATACATGTTGCACAGTTGATCCCAATTCCAAAACAAACACACCCACAGATGAACAAGAATTTCCACTCCCTCAGAAAGGTGGTGACCTTAGCATAATCTATGATGTCACAAAAACATATGAATCCAATTACTGGGCAGAGGTCACAGTTTCAAACAACAACCCCATTGGCCGTCTTGACCATTGGAAACTCAGCTGGGAATGGATCAATGATGAGTTCATATACACAATGAAAGGTGCATATCCATCAAACGTTGATTCTTCTGAATGTATCTTTGGTTCACAAGGTGAGTACTACAAGAAACTTGACTTTGCCGATGTGTTGAACTGCGAAAGAAGGCCAACCGTAGTTGATCTCCCTCCAACAAGGTTCAATGATTCAAAACTTGGTAAAGTCCCATTTTGCTGCAGAAATGGTACATTGTTGCCACCCACAATGGATCCTAGTAAGTCAATTTCAAGGTTCCAAATGCAGGTCTTCAAGATGCCTCCAAACATCAATCGTTCCCACCTTGCGCCACCTAGGAACTGGAAGATAAGTGGTGAGGAACTCAACCCTGAATACCAATGTGGGAATCCTGTTAGGGTGAGTCCTAGTGAGTCTTTGGATCCAACAGGTTTGCCATCAAATACATCTGCAATTGCAAGTTGGCAAATTCTCTGCAACATAACAAGGAACACAAGAAAAAGCAAATGTTGTGTCTCATTTTCAGCTTTTTTCAATGAATCTGTTGTTCCCTGCCAAACATGTGCATGTGGATGCTCCGCGAAGTCAGAGAGGACGTGCAGTGTGGCTGAACCGGCTGTTCTGCTTCCCCCGGAGGCACTTCTTGTTCCATTTGAGAATAGAACAAAAATGGCTCATACTTGGGCTGACAGAAAGCATCTATCAGTGCCTAATCCTATGCCTTGTGGTGATAACTGTGGTGTGAGCATCAACTGGCATGTGAATACAGATTACCGGCGAGGTTGGACTGCAAGGATCACGCTTTTCAACTGGGGCGAAACTGATTTCGCAGACTGGTTTGTCGCAGTGGAAATGGATAAAGCAGCCCCTGGTTTTGAGAAAATGTACTCATTCAATGCTAGTTCATTAGACAAAGTGAAGAACACAATATTCATGCAAGGAAAGGAAGGATTGAACTTCCTTGTAGCCGAAGCAAATGGATCCAACCCAAAAAAAGATCCGAAGGTGCCCGGGAAACAACAATCCGTGATCTCATTTAGAAAGAAAAATACTCCTGGAATCGAAGTGGTAGATGGTGATGGATTTCCCAATAAAGTATTCTTCAATGGTGAGGAATGTTCTCTTCCTTTGGTATATCCAAGCAGTGGTTTCAGGAATGAGTTTTCTTTTGTTCCCATGTTGCTCCTGATGTTGTTGCCAATCATATGGATGTGGCAATAG 1950 0.4697 MAMALHDHVFFYIFVIISAAPLSLSQPQAASSCNGIFLSYTYTSGYRLPPNTSDTADQPYRFTSELTVLNNGLEDLKSWKVFVGFRHREWLVSASNAELADGTGLPAAVGNGTVLEGSEVRDLKTAAETAGDLKQMMVTVDMVGTVFGVAPPNVPMPSTIRLSNEGFICRKPTSQAGNNETHTCCTVDPNSKTNTPTDEQEFPLPQKGGDLSIIYDVTKTYESNYWAEVTVSNNNPIGRLDHWKLSWEWINDEFIYTMKGAYPSNVDSSECIFGSQGEYYKKLDFADVLNCERRPTVVDLPPTRFNDSKLGKVPFCCRNGTLLPPTMDPSKSISRFQMQVFKMPPNINRSHLAPPRNWKISGEELNPEYQCGNPVRVSPSESLDPTGLPSNTSAIASWQILCNITRNTRKSKCCVSFSAFFNESVVPCQTCACGCSAKSERTCSVAEPAVLLPPEALLVPFENRTKMAHTWADRKHLSVPNPMPCGDNCGVSINWHVNTDYRRGWTARITLFNWGETDFADWFVAVEMDKAAPGFEKMYSFNASSLDKVKNTIFMQGKEGLNFLVAEANGSNPKKDPKVPGKQQSVISFRKKNTPGIEVVDGDGFPNKVFFNGEECSLPLVYPSSGFRNEFSFVPMLLLMLLPIIWMWQ* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g0972 649 PANTHER COBRA-LIKE PROTEIN 7 1 645 - -
Ahy14g0972 649 Pfam COBRA-like protein 225 405 IPR006918 GO:0010215|GO:0031225
Ahy14g0972 649 PANTHER COBRA-LIKE PROTEIN 7 1 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g0972 Ahy-Chr14 16202560 16206010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g0972 17 632 COBRA Gene Family AT4G16120 61.199 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g0972 - - mtr:MTR_2g034950 957.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0972 14 16202560 16206010 Ahy14g0972 14 16202560 16206010 ECH
Ahy14g0972 14 16202560 16206010 Ahy4g0888 4 15083103 15086371 hybridization
Ahy11g2614 11 142360673 142363214 Ahy14g0972 14 16202560 16206010 PCT
Ahy1g2317 1 101174384 101176856 Ahy14g0972 14 16202560 16206010 PCT
Ahy14g0972 14 16202560 16206010 Ahy11g2614 11 142360673 142363214 PCT
Ahy14g0972 14 16202560 16206010 Ahy1g2317 1 101174384 101176856 PCT