Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g0535 ATGACCAACTTCGTTGTTGTTGACAACCAAAAGGGTAACATATCAAGAGGGAAGTATTTATTATTCTTCAGTCATAGGACAATCGTCAGTCATGTCGAGAATCCCAGTTTTCTGCTAAATGCTTTCCGATTCAAAACCATCCGTGAGTTACTATATGCTGAGAGGATCGATGACTCTGCATTGTTTGACATGATTGGTGAAGTAGTTGGTAAAGAAGATCCAAAAGAGTTTATCACCAGCAAAGGAAAGGAGACTAAACGACTGGCTATTATCTTGAAGGGCCTCAAAAACAATAGGATTGGGTGCACTATATTTGGTGAAATGGTTGACCAGCTACTTCAACACATGCAAGATGGAAGGGTTGAGCCACTAATAGTTGTGGTCCAGTATTTTAAGGCAACGAGATGGAATGGCAAGACATCTATCCAAAGCCATTTTGACATGTCACAGCTGCACATAGACCCGACCTTAAAGATGTTGCTGAATTTAGGAGTAGTTGATGATCCTTTTGAACTAATGTGTAGGCTGCTTGGCGGTGAACCATCATCCTCTGTGAGGATTAGTCAAGAAGGTCCAGCTTGGATTGCTGCAACCATTGTTGCGATTAATGTTACAAAGGATGATTGGTTCTATAAATCATGTAGAAAATGTCCAAAGAAAGTAGAAATTCCTATTGAAAACAGATATGAATGTGGGAAGTGTGGCCATACACATGGATCTACAGCCCTAAGGTTCAAAGTCGAGGTGATGGTTTTTGACAGAACCAGTAGCATCTGCTTGCTACTGTGGGACAAGGAAACAAGTATGCTTTGTGGGAAGAGAGCTGAACAGATTATGGAAGACCATGTTATAATGGGAGATGAATATCCCAAAACACTTGATAACATGATGGACAAAAGAGTCCTTTTCAAGATAAATATCAAAGAAGCCAACATTAATCAGTTTGATCATGTGTACATAGTTATGAAAATTTGTGATGATGAGGATATCATTGACAAAAATCTTCCCAAAGAGTTGTTTACTAATCTTCCGAGTAATGTCAGTGAAAATGGCTGCAACAACTATTTGGAAATTTCAGGAAATGTGGCTAATCTTAAAACTGATTGTGATATTGAGTCTTCTATGGATGTCGTGGAGGAGTGCATCTCATCCCTCAAGTACCAAACACCATCTAAAAGAATTACCAATGTATTGAAGAATTCTTCCCCAAGTCTGGATGAACATGAGGAAGAAGGCCAGCTGTCAACCAACAGGTTTAGCAGGCAGATGGGAAATAGACAGAAATGTGTTAACCTTGATGCAGATATATGA 1311 0.3936 MTNFVVVDNQKGNISRGKYLLFFSHRTIVSHVENPSFLLNAFRFKTIRELLYAERIDDSALFDMIGEVVGKEDPKEFITSKGKETKRLAIILKGLKNNRIGCTIFGEMVDQLLQHMQDGRVEPLIVVVQYFKATRWNGKTSIQSHFDMSQLHIDPTLKMLLNLGVVDDPFELMCRLLGGEPSSSVRISQEGPAWIAATIVAINVTKDDWFYKSCRKCPKKVEIPIENRYECGKCGHTHGSTALRFKVEVMVFDRTSSICLLLWDKETSMLCGKRAEQIMEDHVIMGDEYPKTLDNMMDKRVLFKINIKEANINQFDHVYIVMKICDDEDIIDKNLPKELFTNLPSNVSENGCNNYLEISGNVANLKTDCDIESSMDVVEECISSLKYQTPSKRITNVLKNSSPSLDEHEEEGQLSTNRFSRQMGNRQKCVNLDADI* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g0535 436 PANTHER BNAC07G49340D PROTEIN 51 385 - -
Ahy14g0535 436 SUPERFAMILY Nucleic acid-binding proteins 43 158 IPR012340 -
Ahy14g0535 436 Pfam Replication factor-A C terminal domain 197 317 IPR013955 -
Ahy14g0535 436 Gene3D - 39 164 IPR012340 -
Ahy14g0535 436 Gene3D - 181 333 IPR012340 -
Ahy14g0535 436 SUPERFAMILY Nucleic acid-binding proteins 193 325 IPR012340 -
Ahy14g0535 436 PANTHER REPLICATION FACTOR A 1, RFA1 51 385 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy14g0535 436 CDD RPA1_DBD_C 187 313 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g0535 Ahy-Chr14 7114130 7116293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g0535 33 278 Core DNA Replication Machinery Family AT4G19130 25.275 1.97e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g0535 - - aip:107635940 884.404