Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g0512 ATGAGTCAACTCGGCGATATTCTTCAGACGGAGCCAAGGACGATTCTCGGATTGTTGACGGAGCAAATGGACGCCGCCGCCGATGGACCGCCGCGCACCAGGACCAGGCGCACCTTCAAGGACCGTTTAGGATTCATCGGCATCGGCTGTTGCGGTGCCACGTGGCGATTCCGTTCTGAGTCCATAACGGTCAGGCACGAAGACCAAGAACAACAGCAACAGCCACAGCAACAGCATCAACAGCACCAACCGCTTCTTCTTGAATCGAATCAGGCTCGAGATCCGAACCGTTTTGGACCTGACTGCGTGTCTCCGACTCCTGCCAGTTCCGGTATGAACCTTGCGGCGGCGTTAGCGGCTGAGCGGCAGCTCCGGGGGCCGCCGCAGGAGGCGGAGGGAGGTGAGAGAAGAGGTGTGCCGTGGAGGGTGTCGCTGATGAGGCTGCTGGAGGAGACCGACGGCGGCGATGCAGAGGTTAGTTCGGCGGCGAAGACATCGGATGAAGATAAGATAAGTGGAAGTGGTGGTGGTGGTGTGGGAAATGATTGGGTGTGCTGCGTGTGCATGGGGAGGAAGAAAGGCGCGGCGTTCATACCATGTGGTCACACTTTTTGCAGGGTTTGTTCAAGGGAGCTGTGGCTCAACCGAGGCTCTTGTCCCCTTTGCAATCGTTCCATTCTCGAGATTCTCGACATTTTCTGA 702 0.5755 MSQLGDILQTEPRTILGLLTEQMDAAADGPPRTRTRRTFKDRLGFIGIGCCGATWRFRSESITVRHEDQEQQQQPQQQHQQHQPLLLESNQARDPNRFGPDCVSPTPASSGMNLAAALAAERQLRGPPQEAEGGERRGVPWRVSLMRLLEETDGGDAEVSSAAKTSDEDKISGSGGGGVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g0512 233 MobiDBLite consensus disorder prediction 91 110 - -
Ahy14g0512 233 SUPERFAMILY RING/U-box 181 230 - -
Ahy14g0512 233 MobiDBLite consensus disorder prediction 68 83 - -
Ahy14g0512 233 PANTHER OS01G0917900 PROTEIN 13 233 - -
Ahy14g0512 233 SMART ring_2 185 222 IPR001841 -
Ahy14g0512 233 ProSiteProfiles Zinc finger RING-type profile. 185 223 IPR001841 -
Ahy14g0512 233 Pfam Zinc finger, C3HC4 type (RING finger) 184 227 - -
Ahy14g0512 233 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 13 233 - -
Ahy14g0512 233 MobiDBLite consensus disorder prediction 153 174 - -
Ahy14g0512 233 MobiDBLite consensus disorder prediction 64 83 - -
Ahy14g0512 233 CDD RING-HC 185 222 - -
Ahy14g0512 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 179 232 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g0512 Ahy-Chr14 6824321 6825763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g0512 15 233 C3H Transcription Factor Family AT4G22250 50.446 1.23e-59 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g0512 - - aip:107638663 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0512 14 6824321 6825763 Ahy14g0512 14 6824321 6825763 ECH
Ahy14g0512 14 6824321 6825763 Ahy4g0430 4 5456039 5456737 hybridization
Ahy11g2314 11 137032784 137033873 Ahy14g0512 14 6824321 6825763 PCT