Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g0434 ATGGAAAACTTCACCTTGTCTTGGTCTTCTTCTTCATCTTCAACTTCTCCTCCTTCATCATCGCACATTGCAGGTGCAGCTTTCGACGACTATTCCGAGGACTTCTGCAGCATTTGTTTGGAGCCATTTGGCATCAATGACCCATCTACTATCACCTCTTGCAAACACGAATATCATCTGCACTGTATTCTTGAATGGTCAGAGAGAAGCAGAGAATGTCCAATATGTTTGCAGCTGCTTTCTTTCATTGATCCTTCTAGCCAAGAGCTTCTAGCTGCAGTGGAGGCTGAAAAATGTTCAAGGTCAAGAAACATATATCCATCTTCATTAACTAGTTCCCATATTCCCCATGAGCAGCTCAATTATGACTATGGCGATTCTTACTCAGATGAGTCTGATATTGATGATCAAATTATGCAACACCTAGTTGCTGCTTCAAGCAGATCTCGTTTTCTCCATAGACGGGAAAGGCAAAGATCTTCTAGTGCAGGTCCATCAGAGGTGTTTGTTTCCAATCCTCCTGTGCATGTGCCTGCTGTGCGACCAATACTCACCATTTCACCCACCGGCAGTAGTTCACCAACTTCTGGTGTACCGTCTACTGTTCACATTCAACCTCCAACATCTGCTTTTCCCCCAGTTGTTGGTGAAGTTGCAGGAATTACTACTGCTGAGAATGATGTTCCTTTCAAACCCAGAGTTCTGTATACCCAGTCACCATCCGAGAGTGGAAGGAGACTAAATACCCCTGAGATGTTCTCTATCCCTGAGTCCTTCAGATCCAAATTTTCTGCTGCTTCAGCCAGGTATAAGGAATCAATAACCAAAAGTACTCGTGGCCTTAAAGAGAAGTTAATTGCTCATAATGCCTCAGTAAAAGAGCTGAGTAAAGGTGTTCAGCGTGAGATGAATGCAGGAATTGCTGGTGTTGCACGGATGATTGAACGCCTTGATCTTTCCTCAAAGCGATCTAATTTTCCTCCCACTCCTGTTGGCACTGGGGGAAGTTCGGGATCCCCTGTAAAAGGAAAGTCAGTCGATGAGGATGACATTGACACTGGGCGTTCTCCTAGCATATACACTGAAAATGTGGTTCAGAATGTTAGCTCAGATGCTCCTTCAGTACCTGGCATGGTTGTTGGTCGAGTGGTTGCTGGTCGGGTGGAAATTCATCATTGTGTTCAGAGTGGAAAAGATGCTGCTGTGAGGACATAG 1215 0.4477 MENFTLSWSSSSSSTSPPSSSHIAGAAFDDYSEDFCSICLEPFGINDPSTITSCKHEYHLHCILEWSERSRECPICLQLLSFIDPSSQELLAAVEAEKCSRSRNIYPSSLTSSHIPHEQLNYDYGDSYSDESDIDDQIMQHLVAASSRSRFLHRRERQRSSSAGPSEVFVSNPPVHVPAVRPILTISPTGSSSPTSGVPSTVHIQPPTSAFPPVVGEVAGITTAENDVPFKPRVLYTQSPSESGRRLNTPEMFSIPESFRSKFSAASARYKESITKSTRGLKEKLIAHNASVKELSKGVQREMNAGIAGVARMIERLDLSSKRSNFPPTPVGTGGSSGSPVKGKSVDEDDIDTGRSPSIYTENVVQNVSSDAPSVPGMVVGRVVAGRVEIHHCVQSGKDAAVRT* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g0434 404 ProSiteProfiles Zinc finger RING-type profile. 36 76 IPR001841 -
Ahy14g0434 404 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 81 IPR013083 -
Ahy14g0434 404 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 12 374 - -
Ahy14g0434 404 MobiDBLite consensus disorder prediction 322 340 - -
Ahy14g0434 404 MobiDBLite consensus disorder prediction 321 357 - -
Ahy14g0434 404 SMART ring_2 36 76 IPR001841 -
Ahy14g0434 404 MobiDBLite consensus disorder prediction 184 205 - -
Ahy14g0434 404 Pfam Ring finger domain 36 76 IPR001841 -
Ahy14g0434 404 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF1A 12 374 - -
Ahy14g0434 404 SUPERFAMILY RING/U-box 28 83 - -
Ahy14g0434 404 MobiDBLite consensus disorder prediction 185 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g0434 Ahy-Chr14 5783829 5786960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g0434 20 84 C3H Transcription Factor Family AT4G00335 44.615 4.42e-13 65.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0434 14 5783829 5786960 Ahy4g0354 4 4491850 4495056 hybridization