Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g0286 ATGTCATTCAGCTTCGTGCTCTCCGTTTCCAGTTCTAATGATGTTCCAATGGACGCTCAACAAACTACCAACAGAATGTGTTCTATAACTCAAATGAAGCAATTCCAATCAAATTCTGCGGGTGGTCTTCATTGTCAAGGTAAAAGGCCAAGTGTCAATTGGTCGCAACATGAAGAAGCACATCAAAACTTTTCCTGCCAGCTCAAGTTCTTGAGCTCCAATTTCCTATTCTCTTTGCCAACACAGAAGCCTCAAAATGGAGAACCAACGGATGGGAGGTTTGTAATCAATCAGAATCCAAATATTCAGACTTCACAGAGGGCACAAGTTGAGAAGGCTTGGCTTGCTCTTTCAAGTCTCCAGAATTCTAGCAGGAGCTATCCCCAACCTGGAAAAACTGTTCAAGTTACTCCTCGGCACCATGAAGACAGGCGAATGAACCCCTTACAAAGGACCCATGAGAACGATAAGCTTAAGCCTCCTGATGTTACCACAACTCCAATTGTTACTAATCATAATTCACAAGTTTTGGACAGTTCAGTGAACAAGCATATCAAGCATGCTGGCCAAATCAACGAGTCATCAACAGGCATGGTTGTTGACATTGATGATGATGACATACTTGAGACCATTGATATTGATCAAATAGTGGAGAATTATCAGTCTTCTTCCACACCCAAACCTCCAATTTCCAAATTCCCTCCTATTACACCAACTGCAGATACAAATAATTTTGCTAGAGACGGGGGTAACTGTTTGCCACCAGAACTGTGTATAGATTGCAATCATGGTTACAAGTTAGGGCTTTGTCCTGAAGCAACAAGTCATTTGCAGGAATTTAAGGATAATCTGATTGCTATTTCTAATGAACTACTTGACAATGTTGACAACCTTACTTCTTTGCAGTTGGCAAAGCTTCGGCAAGATAGGTCACAGCTGAATATGAAAATTCAGCAGCTTGAAAAATATATTCATTCCAATAATCTTGAGGACAGGAAAAAGTCAAATTTGTTTGCATCCACAGCACCTACATCATTTGTATATGAAACTCCTCAGCAGACTCTCCACAGTAATGCACCAAAGACATATGAATCTCAGGATTATGTGGGTAATGGGACATGTGGGTCATTGTTCCAGTCTCTTTCATTCTCTTGTGCCGATACATATGGCGTGTCATCAGGTCCAGTGTCGAGGGAAGCTTTCATCCCAAAGATTATTGAAGTAAATTACATTGAAGGTTCTGGAGACAAGCGCTGGAGCAGTAAGGATTTTCCTTGGACAAAACAGTTGGAGGTTAATAATAAAAAAGTTTTTGGAAATCACTCATTCCGCCCCAATCAAAGAGAGATCATTAATGCCACAATGAGTGGATGTGATGTTTTTGTTTTGATGCCCACTGGTGGAGGAAAGAGTCTGACCTATCAGCTGCCAGCTCTTATCTGTCCTGGTATAACATTAGTAATTTCTCCCCTTGTGTCCCTTATTCAAGATCAAATTATGCATCTACTACAGGCAAATATATCCGCTGCTTACTTAAGTGCTAATATGGAATGGACTGAACAGCAAGAGATCTTTAGAGAACTTAATTCCGAATATTGTAATTATAAGTTGTTGTATGTAACACCAGAAAAGATTGCCAAAAGTGACGCGCTTTTACGAAACTTGGAGAGTTTACATGCTCGAGAATTGCTTGCAAGAATTGTAATTGATGAGGCTCACTGTGTGAGCCAATGGGGGCATGATTTTAGACCAGATTATCAGGGACTTGGCATATTGAAACAGAAATTCCCAAATACTCCTGTTTTAGCTTTAACAGCTACTGCAACAGCTAGTGTCAAAGAGGACGTTGTGCAAGCATTAGGACTTGTTAACTGCATTGTTTTCCGGCAGAGTTTTAATCGCCCAAACTTAAGGTATTCTGTCCTTCCCAAGACCAAAAAGTGTTTGGAAGATGTTGACAAATTCATTAGGGAAAACCATTTTGATGAGTGTGGCATTATATATTGCCTTTCTCGAATGGACTGTGAAAAGGTTGCTGAAAAGTTGCAGGAGTTTGGACATAAGTCTGCATTTTATCATGGTAACATGGATCCTGCTCAACGTGCCTTTGTTCAAAAGCAGTGGAGTAAAGATGAGATCAATATAATTTGTGCTACTGTGGCATTTGGAATGGGTATTAACAAGCCTGATGTTCGCTTCGTAATCCATCATTCCCTTCCAAAATCTATTGAAGGTTATCATCAGGAATGTGGACGAGCTGGTAGAGATGGTCTACGTTCTTCCTGTATATTATATTACAGCTACAGTGATTATATTCGAGTTAAGCATATGATAAGTCAAGGAGCAATAGAGCAAAATTCAATGACATATGGATACAGTCGCTCAAATATGACAAATTCAGGAAGGATATTGGAAACAAACACTGAAAACCTTTTGCGAATGGTCAGTTATTGTGAAAATGACGTTGATTGTAGGCGTCTTCTGCAGCTTGCTCATTTTGGGGAGAAGTTTGATTCTTCAACATGTCAGAAAACATGTGATAATTGTTTGAAGAACACAAGTTTTATTGAGAAAGATGTCACCGAGATTGCAAAGCAATTGGTTGAACTGGTTAAGCTAACTGGGCAGAAGGTCTCATCATCACATATATTAGAAGTCTATCGTGGATCCTTAAGCCAGTTGGTCAAGAAACACCGTCATGATACTTTGAGCTTTCATGGTGCTGGGAAGCGTCTAGCTAAGGGTGAGGCTTCCCGAGTATTGCATCATCTTGTTGTAGAGGATTTTCTTGTGGAGGAGGTTAAAAAAAGTGATTTTTATGGATCAGTATCATCAATATTGAAGGTAAATGACCCCAAGGTCCACAACCTGTTGCTCGGGGGCCAGAGAATTATACTGAGGTTCCCATCGTCCATAAAAGCATCAAAATTAGCGAAGTATGAGTTCACTCCAGCTAAAGGATCTCTGACATCTGGAAAACAAAATAGTCATCAAATTGATACTCCTGCTCAGCCCCAAACTCAAGTTGACATGAATCTTTCAGCAAAGTTATACTCAGCACTGCGGTTGCTGCGGGCAACTATTCTTGGTGAAGCTGGAGACGATGTCTTGGCTCACCACGTGTTCTGTAATTCTCTGTTGCAGCTGATGAGCAAGAAAGTACCAAGAACAAAGGAAGAACTCCTTGAACTCAATGGCATGAGCAAGGCCAAGGTAAGCAATTATGGTGATCAGATACTGGAAACCATCGAAAATACTATTAATGAGTATTACAAGTTGGATAAAAGCAGCAATGGCAGTGCTGATTCTGCAAAAAGGAGACGAGATGCAAATGGAGGCCTAGATAGAAATCTTGAGGATGATGATGAGTTGCCTAAAAGTACTGGTCGCTCAAAGAAAAGGACAGTGCAGAGAAATAATAAAAAGGCTGAGATATACCATTCTGAAGAGGAAGATAATTACTATGGATGTCTTGATGAGGACCTAGATTTTGACAATATAGAAAATGAAGCACTAAATAGAATAAACAGTAGGAATGCTAATGGAAGAGTACTGCCTCAATGGACACCATCTTGA 3576 0.4016 MSFSFVLSVSSSNDVPMDAQQTTNRMCSITQMKQFQSNSAGGLHCQGKRPSVNWSQHEEAHQNFSCQLKFLSSNFLFSLPTQKPQNGEPTDGRFVINQNPNIQTSQRAQVEKAWLALSSLQNSSRSYPQPGKTVQVTPRHHEDRRMNPLQRTHENDKLKPPDVTTTPIVTNHNSQVLDSSVNKHIKHAGQINESSTGMVVDIDDDDILETIDIDQIVENYQSSSTPKPPISKFPPITPTADTNNFARDGGNCLPPELCIDCNHGYKLGLCPEATSHLQEFKDNLIAISNELLDNVDNLTSLQLAKLRQDRSQLNMKIQQLEKYIHSNNLEDRKKSNLFASTAPTSFVYETPQQTLHSNAPKTYESQDYVGNGTCGSLFQSLSFSCADTYGVSSGPVSREAFIPKIIEVNYIEGSGDKRWSSKDFPWTKQLEVNNKKVFGNHSFRPNQREIINATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANISAAYLSANMEWTEQQEIFRELNSEYCNYKLLYVTPEKIAKSDALLRNLESLHARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIVFRQSFNRPNLRYSVLPKTKKCLEDVDKFIRENHFDECGIIYCLSRMDCEKVAEKLQEFGHKSAFYHGNMDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGLRSSCILYYSYSDYIRVKHMISQGAIEQNSMTYGYSRSNMTNSGRILETNTENLLRMVSYCENDVDCRRLLQLAHFGEKFDSSTCQKTCDNCLKNTSFIEKDVTEIAKQLVELVKLTGQKVSSSHILEVYRGSLSQLVKKHRHDTLSFHGAGKRLAKGEASRVLHHLVVEDFLVEEVKKSDFYGSVSSILKVNDPKVHNLLLGGQRIILRFPSSIKASKLAKYEFTPAKGSLTSGKQNSHQIDTPAQPQTQVDMNLSAKLYSALRLLRATILGEAGDDVLAHHVFCNSLLQLMSKKVPRTKEELLELNGMSKAKVSNYGDQILETIENTINEYYKLDKSSNGSADSAKRRRDANGGLDRNLEDDDELPKSTGRSKKRTVQRNNKKAEIYHSEEEDNYYGCLDEDLDFDNIENEALNRINSRNANGRVLPQWTPS* 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g0286 1191 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 435 910 IPR004589 GO:0004386|GO:0006310
Ahy14g0286 1191 Gene3D HRDC domain 1007 1094 IPR044876 -
Ahy14g0286 1191 Gene3D - 407 633 IPR027417 -
Ahy14g0286 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 632 901 IPR027417 -
Ahy14g0286 1191 Coils Coil 303 323 - -
Ahy14g0286 1191 CDD DEXHc_RecQ 434 633 - -
Ahy14g0286 1191 SUPERFAMILY HRDC-like 1014 1087 IPR010997 GO:0000166|GO:0044237
Ahy14g0286 1191 MobiDBLite consensus disorder prediction 1094 1147 - -
Ahy14g0286 1191 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE 4A 143 1159 - -
Ahy14g0286 1191 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 651 801 IPR001650 -
Ahy14g0286 1191 Pfam HRDC domain 1015 1083 IPR002121 GO:0003676
Ahy14g0286 1191 Pfam RQC domain 856 971 IPR018982 GO:0006260|GO:0006281|GO:0043138
Ahy14g0286 1191 MobiDBLite consensus disorder prediction 1099 1130 - -
Ahy14g0286 1191 Gene3D - 857 967 IPR036388 -
Ahy14g0286 1191 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 565 574 IPR002464 -
Ahy14g0286 1191 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 451 626 IPR014001 -
Ahy14g0286 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 418 775 IPR027417 -
Ahy14g0286 1191 SMART helicmild6 676 757 IPR001650 -
Ahy14g0286 1191 MobiDBLite consensus disorder prediction 122 144 - -
Ahy14g0286 1191 ProSiteProfiles HRDC domain profile. 1011 1093 IPR002121 GO:0003676
Ahy14g0286 1191 PANTHER DNA HELICASE RECQ FAMILY MEMBER 143 1159 - -
Ahy14g0286 1191 SMART hrdc7 1011 1093 IPR002121 GO:0003676
Ahy14g0286 1191 Pfam DEAD/DEAH box helicase 445 613 IPR011545 GO:0003676|GO:0005524
Ahy14g0286 1191 Gene3D - 634 853 IPR027417 -
Ahy14g0286 1191 SMART ultradead3 439 642 IPR014001 -
Ahy14g0286 1191 Pfam Helicase conserved C-terminal domain 652 756 IPR001650 -
Ahy14g0286 1191 SMART RQC_2 859 970 IPR018982 GO:0006260|GO:0006281|GO:0043138
Ahy14g0286 1191 CDD SF2_C_RecQ 634 766 - -
Ahy14g0286 1191 Pfam RecQ zinc-binding 768 850 IPR032284 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g0286 Ahy-Chr14 4177712 4185508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g0286 665 780 Eukaryotic Initiation Factors Gene Family AT3G19760 25.000 3.08e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g0286 K10901 - gmx:100800006 1696.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0286 14 4177712 4185508 Ahy14g0286 14 4177712 4185508 ECH